Code
dim(mtcars)[1] 32 11Code
nrow(mtcars)[1] 32Code
ncol(mtcars)[1] 11Slides - Tools
Aims
By the end of the session, you will:
- understand how to use the most important panels in the RStudio interface
- create an RStudio Project to store your work throughout the course
- begin using R scripts (.R) and Quarto notebooks (.qmd) to record and document your coding progress
- understand data types and basic operations in the
Rlanguage - understand the principles behind functions
- know how to install, load and use functions from user-written packages
- gain familiarity with some useful functions from packages included in the tidyverse ecosystem.
This lab is an introduction to R and RStudio for the purposes of this module. Those new to R should also complete the R for Social Scientists online training course on their own (estimated to take around 5-6 hours), as well as read through the assigned chapters from the R4DS textbook.
R and RStudio
To install R and RStudio on your personal computers, follow the steps outlined here based on your operating system.
Although you will only interact directly with RStudio in this module, R needs to be installed first.
Think of the relationship between the two as that between the engine of a car (R) and the dashboard of a car (RStudio):
Or perhaps imagine driving the car on the left vs. the one on the right:
The RStudio interface
The RStudio interface consists of four main panes (which can be customised to some degree):
The R Console Pane
The R Console, by default the left or lower-left pane in R Studio, is the home of the R “engine”. This is where the commands are actually run and non-graphic outputs and error/warning messages appear. The Console is the direct interface to the R software itself; it’s what we get if instead of RStudio we open the R software: a direct interface to the R programming language, where we can type commands and where results/messages are printed.
You can directly enter and run commands in the R Console, but realize that these commands are not saved as they are when running commands from a script. For this reason, we should not use the Console pane directly too much, ad reserve it only for quick and dirty calculations and checks. For typing commands that we want R to execute, we should instead use an R script file, where everything we type can be saved for later and complex analyses can be built up.
The Source Pane
This pane, by default in the upper-left, is a space to work with scripts and other text files. This pane is also where datasets (data frames) open up for viewing.
Note
If your RStudio displays only one pane on the left, it is because you have no scripts open yet. We can open an existing one or create a new one. We’ll do that a bit later.
The Environment Pane
This pane, by default in the upper-right, is most often used to see brief summaries of “objects” that are available in an active session. Datasets loaded for analysis would appear here.
Note
If your Environment is empty, it means that you don’t have any “objects” loaded or created yet. We will be creating some objects later and we will also import an example dataset.
Files, Plots, Packages, Help, etc. The lower-right pane includes several tabs including plots (display of graphics including maps), help, a file library, and available R packages (including installation/update options).
Tip
You can arrange the panes in various ways, depending on your preferences, using Tools > Global Options in the top menu. So the arrangement of panes may look different on different computers.
General settings
You can personalise the look and feel of your RStudio setup in various ways using Tools > Global Options from the top menu, but setting some options as default from the very start is highly recommended. You can see these in the pictures below:
- The most important setting in the picture on the left is the one to restore .RData at startup and saving the workspace as .RData on exit. Make sure these are un-ticked and set to ‘Never’, respectively, as shown in the picture. It’s always safer to start each RStudio session in a clean state, without anything automatically pre-loaded from a previous session. That could lead to serious and hard to trace complications.
- In the picture on the right, you have the option to select that the new native pipe operator (|>) (we’ll talk about it later!) be inserted using the
Ctrl+Shift+Mkeyboard shortcut instead of the older version of the pipe (%>%).
These settings will make more sense later, but it’s a good idea to have them sorted at the very beginning.
Scripts, markdown documents and projects
Writing brief commands that you want to test out in the Console is okay, but what you really want is to save your commands as part of a workflow in a dedicated file that you can reuse, extend and share with others.
In every quantitative analysis, we need to ensure that each step in our analysis is traceable and reproducible. This is increasingly a professional standard expected of all data analysts in the social sciences. This means that we need to have an efficient way in which to share our analysis code, as well as our outputs and interpretations of our findings. RStudio has an efficient way of handling this requirement with the use of R script files and versions of the Markdown markup language that allow the efficient combining of plain text (as in the main body of an article) with analysis code and outputs produced in R. The table below lists the main characteristics of these file types:
| Format | Extension | Description |
|---|---|---|
| R Script | .R | Use an R script if you want to document a large amount of code used for a particular analysis project. Scripts should contain working R commands and human-readable comments explaining the code. Commands can be run line-by-line, or the whole R script can be run at once. For example, one can write an R script containing a few hundred or thousands of lines of code that gathers and prepares raw, unruly data for analysis; if this script can run without any errors, then it can be saved and sourced from within another script that contains code that undertakes the analysis using the cleansed dataset. Comments can be added by appending them with a hashtag (#). |
| R Markdown | .Rmd |
Markdown is a simple markup language that allows the formatting of plain text documents. R Markdown is a version of this language written by the R Studio team, which also allows for R code to be included. Plain text documents having the .Rmd extension and containing R Markdown-specific code can be “knitted” (exported) directly into published output document formats such as HTML, PDF or Microsoft Word, which contain both normal text as well as tables and charts produced with the embedded R code. The code itself can also be printed to the output documents. |
| Quarto document | .qmd | Quarto is a newer version of R Markdown which allows better compatibility with other programming languages. It is a broader ecosystem design for academic publishing and communication (for example, the course website was built using quarto), but you will be using only Quarto documents in this module. There isn’t much difference between .Rmd and .qmd documents for their uses-cases on this module, so one could easily change and .Rmd extension to .qmd and still produce the same output. .qmd documents are “rendered” instead of “knitted”, but for RStudio users the underlying engine doing the conversion from Quarto/R Markdown to standard Markdown to output file (HTML, PDF, Word, etc.) is the same. Read more about Quarto document in the TSD textbook. |
Creating new files can be done easily via the options File > New File > from the top RStudio menu.
The best way to use these files are as part of R project folders, which allow for cross-references to documents and datasets to be made relative to the path of the project folder root. This makes sure that no absolute paths to files (i.e. things like “C:/Documents/Chris/my_article/data_files/my_dataset.rds”) need to be used (instead, you would write something like “~/data_files/my_dataset.rds” if the “my_article” folder was set up as an R Project). This allows for the same code file to be run on another computer too without an error, ensuring a minimal expected level of reproducibility in your workflow.
Setting up an existing or a new folder as an R Project involves having a file with the extension .RProj saved in it. This can be done easily via the options File > New Project from the top RStudio menu.
Data frames
It is useful to know about vectors, but we will use them primarily as part of larger data frames. Data frames are objects that contain several vectors of similar length. In a data frame each column is a variable and each row is a case. They look like spreadsheets containing data.
There are several toy data frames built into R, and we can have a look at one to see how it looks like. You can get a list of the available built-in datasets and their brief descriptions with the data() command.
For example, the mtcars data frame is built into R and so you can access it without loading any files. To get the dimensions, you can use the dim(), nrow(), and ncol() functions.
We can also load the dataset into our Environment and look at it manually:
Code
mtcars <- mtcarsThe new object has appeared in the Environment under a new section called Data. We can click on it and the dataset will open up in the Source pane. What do you think this dataset is about?
You can select each column/variable from the data frame use the $, turning it into a vector:
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mtcars$wt [1] 2.620 2.875 2.320 3.215 3.440 3.460 3.570 3.190 3.150 3.440 3.440 4.070
[13] 3.730 3.780 5.250 5.424 5.345 2.200 1.615 1.835 2.465 3.520 3.435 3.840
[25] 3.845 1.935 2.140 1.513 3.170 2.770 3.570 2.780You can now treat this just like a vector, with the subsets and all.
Code
mtcars$wt[1][1] 2.62We can subset to the first/last k rows of a data frame
Code
head(mtcars) mpg cyl disp hp drat wt qsec vs am gear carb
Mazda RX4 21.0 6 160 110 3.90 2.620 16.46 0 1 4 4
Mazda RX4 Wag 21.0 6 160 110 3.90 2.875 17.02 0 1 4 4
Datsun 710 22.8 4 108 93 3.85 2.320 18.61 1 1 4 1
Hornet 4 Drive 21.4 6 258 110 3.08 3.215 19.44 1 0 3 1
Hornet Sportabout 18.7 8 360 175 3.15 3.440 17.02 0 0 3 2
Valiant 18.1 6 225 105 2.76 3.460 20.22 1 0 3 1Code
tail(mtcars) mpg cyl disp hp drat wt qsec vs am gear carb
Porsche 914-2 26.0 4 120.3 91 4.43 2.140 16.7 0 1 5 2
Lotus Europa 30.4 4 95.1 113 3.77 1.513 16.9 1 1 5 2
Ford Pantera L 15.8 8 351.0 264 4.22 3.170 14.5 0 1 5 4
Ferrari Dino 19.7 6 145.0 175 3.62 2.770 15.5 0 1 5 6
Maserati Bora 15.0 8 301.0 335 3.54 3.570 14.6 0 1 5 8
Volvo 142E 21.4 4 121.0 109 4.11 2.780 18.6 1 1 4 2There are various ways in which one can further subset and wrangle vectors and data frames using base R functions, but several user-written packages provide more functionality and ease of use for more complex and specific data wrangling tasks.
Packages
“Base R” Packages
R functions - such as dim(), head() or tail(), which we have used earlier - are bundled within packages. When you install R, a set of “packages” containing various functions are also installed by default. These packages make up what is colloquially referred to as base R. Functions from these packages can be used straight away and they cannot be deleted or installed separately. The functionality of these base R packages is updated with each new edition of R, but not in between new releases of the software. The code below lists the names of all the packages in base R:
Code
names(which(installed.packages()[ ,"Priority"] == "base", )) [1] "base" "compiler" "datasets" "graphics" "grDevices" "grid"
[7] "methods" "parallel" "splines" "stats" "stats4" "tcltk"
[13] "tools" "utils" We see in the list that there is also a package called “base”, which contains 1283 elementary functions. However, when we refer to base R, we usually mean the functions from all the 14 packages listed above.
Apart from these packages that come pre-installed and pre-loaded with our R installation, there are also a number of “recommended” packages, which can be thought of as an extended base R. These packages also come pre-installed in binary distributions of R, but they need to be loaded in order to make their functions available for use. These “recommended” packages are:
Code
names(which(installed.packages()[ ,"Priority"] == "recommended", )) [1] "class" "cluster" "foreign" "KernSmooth" "lattice"
[6] "MASS" "Matrix" "mgcv" "nlme" "nnet"
[11] "rpart" "spatial" "survival" "boot" "class"
[16] "cluster" "codetools" "foreign" "KernSmooth" "lattice"
[21] "MASS" "Matrix" "mgcv" "nlme" "nnet"
[26] "rpart" "spatial" "survival" User-written packages
Apart from these “base” and “recommended” packages, there is a great - and ever increasing - number of user-written packages that satisfy various programming needs. Some packages contain functions that are particularly useful for social scientists.
We could, if we wanted to, programmatically check if a given package is installed on our computer:
Code
Package
abind "abind"
archive "archive"
askpass "askpass"
av "av"
backports "backports"
base64enc "base64enc"
bayesplot "bayesplot"
bayestestR "bayestestR"
bdsmatrix "bdsmatrix"
betareg "betareg"
BH "BH"
bibtex "bibtex"
bigD "bigD"
BiocManager "BiocManager"
BiocVersion "BiocVersion"
bit "bit"
bit64 "bit64"
bitops "bitops"
blob "blob"
brew "brew"
brio "brio"
broom "broom"
broom.mixed "broom.mixed"
bslib "bslib"
cachem "cachem"
calibrate "calibrate"
callr "callr"
car "car"
carData "carData"
cards "cards"
cellranger "cellranger"
checkmate "checkmate"
circlize "circlize"
class "class"
classInt "classInt"
cli "cli"
clipr "clipr"
cluster "cluster"
cmm "cmm"
coda "coda"
collapse "collapse"
collections "collections"
colorspace "colorspace"
colourpicker "colourpicker"
commonmark "commonmark"
conflicted "conflicted"
correlation "correlation"
corrplot "corrplot"
countrycode "countrycode"
cowplot "cowplot"
cowsay "cowsay"
cpp11 "cpp11"
crayon "crayon"
credentials "credentials"
crosstalk "crosstalk"
crul "crul"
curl "curl"
cyclocomp "cyclocomp"
dagitty "dagitty"
data.table "data.table"
dataverse "dataverse"
datawizard "datawizard"
DBI "DBI"
dbplyr "dbplyr"
Deriv "Deriv"
desc "desc"
devtools "devtools"
diffobj "diffobj"
digest "digest"
distributional "distributional"
doBy "doBy"
downlit "downlit"
dplyr "dplyr"
DT "DT"
dtplyr "dtplyr"
duckdb "duckdb"
dygraphs "dygraphs"
e1071 "e1071"
easystats "easystats"
effectsize "effectsize"
ellipsis "ellipsis"
emmeans "emmeans"
emptyRpackage "emptyRpackage"
estimability "estimability"
evaluate "evaluate"
fansi "fansi"
farver "farver"
fastmap "fastmap"
flexmix "flexmix"
flextable "flextable"
fontawesome "fontawesome"
fontBitstreamVera "fontBitstreamVera"
fontLiberation "fontLiberation"
fontquiver "fontquiver"
forcats "forcats"
foreign "foreign"
Formula "Formula"
fortunes "fortunes"
fs "fs"
furrr "furrr"
future "future"
gargle "gargle"
gdtools "gdtools"
generics "generics"
gert "gert"
gfonts "gfonts"
gganimate "gganimate"
ggdag "ggdag"
ggeffects "ggeffects"
ggExtra "ggExtra"
ggforce "ggforce"
ggformula "ggformula"
ggplot2 "ggplot2"
ggpubr "ggpubr"
ggraph "ggraph"
ggrepel "ggrepel"
ggridges "ggridges"
ggsci "ggsci"
ggsignif "ggsignif"
gh "gh"
gifski "gifski"
gitcreds "gitcreds"
GlobalOptions "GlobalOptions"
globals "globals"
glue "glue"
googledrive "googledrive"
googlesheets4 "googlesheets4"
graphlayouts "graphlayouts"
gridExtra "gridExtra"
groundhog "groundhog"
gt "gt"
gtable "gtable"
gtools "gtools"
gtsummary "gtsummary"
GWalkR "GWalkR"
haven "haven"
here "here"
highr "highr"
hms "hms"
htmlTable "htmlTable"
htmltools "htmltools"
htmlwidgets "htmlwidgets"
httpcode "httpcode"
httpuv "httpuv"
httr "httr"
httr2 "httr2"
ids "ids"
igraph "igraph"
ini "ini"
inline "inline"
insight "insight"
installr "installr"
isoband "isoband"
janitor "janitor"
jquerylib "jquerylib"
jsonlite "jsonlite"
jtools "jtools"
juicyjuice "juicyjuice"
kableExtra "kableExtra"
KernSmooth "KernSmooth"
knitr "knitr"
labeling "labeling"
labelled "labelled"
languageserver "languageserver"
later "later"
latex2exp "latex2exp"
lattice "lattice"
lazyeval "lazyeval"
librarian "librarian"
lifecycle "lifecycle"
lintr "lintr"
listenv "listenv"
lme4 "lme4"
lmerTest "lmerTest"
lmtest "lmtest"
lobstr "lobstr"
loo "loo"
lpSolve "lpSolve"
lubridate "lubridate"
magick "magick"
magrittr "magrittr"
marginaleffects "marginaleffects"
markdown "markdown"
MASS "MASS"
Matrix "Matrix"
MatrixModels "MatrixModels"
matrixStats "matrixStats"
maxLik "maxLik"
memoise "memoise"
mgcv "mgcv"
microbenchmark "microbenchmark"
migest "migest"
migration.indices "migration.indices"
mime "mime"
miniUI "miniUI"
minqa "minqa"
mipfp "mipfp"
miscTools "miscTools"
mitools "mitools"
modelbased "modelbased"
modelr "modelr"
modelsummary "modelsummary"
modeltools "modeltools"
mosaic "mosaic"
mosaicCore "mosaicCore"
mosaicData "mosaicData"
munsell "munsell"
mvtnorm "mvtnorm"
nlme "nlme"
nloptr "nloptr"
nnet "nnet"
numDeriv "numDeriv"
officer "officer"
openssl "openssl"
packrat "packrat"
pacman "pacman"
pak "pak"
pander "pander"
panelr "panelr"
parallelly "parallelly"
parameters "parameters"
patchwork "patchwork"
pbkrtest "pbkrtest"
performance "performance"
pglm "pglm"
pillar "pillar"
pkgbuild "pkgbuild"
pkgconfig "pkgconfig"
pkgdown "pkgdown"
pkgload "pkgload"
PKI "PKI"
plm "plm"
plyr "plyr"
png "png"
polyclip "polyclip"
polynom "polynom"
poorman "poorman"
posterior "posterior"
praise "praise"
prettyunits "prettyunits"
processx "processx"
profvis "profvis"
progress "progress"
promises "promises"
proxy "proxy"
pryr "pryr"
ps "ps"
purrr "purrr"
quantreg "quantreg"
QuickJSR "QuickJSR"
R.cache "R.cache"
R.methodsS3 "R.methodsS3"
R.oo "R.oo"
R.utils "R.utils"
R6 "R6"
ragg "ragg"
rappdirs "rappdirs"
rapportools "rapportools"
rbibutils "rbibutils"
rcmdcheck "rcmdcheck"
RColorBrewer "RColorBrewer"
Rcpp "Rcpp"
RcppArmadillo "RcppArmadillo"
RcppEigen "RcppEigen"
RcppParallel "RcppParallel"
Rdpack "Rdpack"
reactable "reactable"
reactR "reactR"
readr "readr"
readxl "readxl"
reformulas "reformulas"
rematch "rematch"
rematch2 "rematch2"
remotes "remotes"
renv "renv"
report "report"
repr "repr"
reprex "reprex"
reshape2 "reshape2"
rex "rex"
rio "rio"
rJava "rJava"
rlang "rlang"
rmarkdown "rmarkdown"
rmsfact "rmsfact"
roxygen2 "roxygen2"
rpart "rpart"
rprojroot "rprojroot"
rsconnect "rsconnect"
Rsolnp "Rsolnp"
rstan "rstan"
rstanarm "rstanarm"
rstantools "rstantools"
rstatix "rstatix"
rstudioapi "rstudioapi"
rversions "rversions"
rvest "rvest"
s2 "s2"
sandwich "sandwich"
sass "sass"
scales "scales"
see "see"
selectr "selectr"
sessioninfo "sessioninfo"
sf "sf"
shape "shape"
shiny "shiny"
shinycssloaders "shinycssloaders"
shinyjs "shinyjs"
shinystan "shinystan"
shinythemes "shinythemes"
sjlabelled "sjlabelled"
sjmisc "sjmisc"
sjPlot "sjPlot"
sjstats "sjstats"
skimr "skimr"
snakecase "snakecase"
softbib "softbib"
sourcetools "sourcetools"
SparseM "SparseM"
spatial "spatial"
StanHeaders "StanHeaders"
statmod "statmod"
stringi "stringi"
stringr "stringr"
styler "styler"
summarytools "summarytools"
survey "survey"
survival "survival"
svglite "svglite"
sys "sys"
systemfonts "systemfonts"
tables "tables"
tabulapdf "tabulapdf"
tensorA "tensorA"
testthat "testthat"
textshaping "textshaping"
threejs "threejs"
tibble "tibble"
tidygraph "tidygraph"
tidyr "tidyr"
tidyselect "tidyselect"
tidyverse "tidyverse"
timechange "timechange"
tinyplot "tinyplot"
tinytable "tinytable"
tinytex "tinytex"
transformr "transformr"
triebeard "triebeard"
truncnorm "truncnorm"
tweenr "tweenr"
tzdb "tzdb"
units "units"
urlchecker "urlchecker"
urltools "urltools"
usethis "usethis"
utf8 "utf8"
uuid "uuid"
V8 "V8"
vctrs "vctrs"
viridis "viridis"
viridisLite "viridisLite"
vroom "vroom"
waldo "waldo"
whisker "whisker"
withr "withr"
wk "wk"
writexl "writexl"
xfun "xfun"
xml2 "xml2"
xmlparsedata "xmlparsedata"
xopen "xopen"
xtable "xtable"
xts "xts"
yaml "yaml"
zip "zip"
zoo "zoo"
base "base"
boot "boot"
class "class"
cluster "cluster"
codetools "codetools"
compiler "compiler"
datasets "datasets"
foreign "foreign"
graphics "graphics"
grDevices "grDevices"
grid "grid"
KernSmooth "KernSmooth"
lattice "lattice"
MASS "MASS"
Matrix "Matrix"
methods "methods"
mgcv "mgcv"
nlme "nlme"
nnet "nnet"
parallel "parallel"
rpart "rpart"
spatial "spatial"
splines "splines"
stats "stats"
stats4 "stats4"
survival "survival"
tcltk "tcltk"
tools "tools"
translations "translations"
utils "utils"
LibPath
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archive "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
askpass "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
av "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
backports "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
base64enc "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
bayesplot "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
bayestestR "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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betareg "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
BH "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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bigD "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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bit "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
bit64 "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
bitops "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
blob "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
brew "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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car "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
carData "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
cards "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
cellranger "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
checkmate "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
circlize "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
class "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
classInt "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
cli "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
clipr "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
cluster "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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collections "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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colourpicker "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
commonmark "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
conflicted "C:/Users/cgmoreh/AppData/Local/R/win-library/4.4"
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fortunes NA
fs "R (>= 3.6)"
furrr "future (>= 1.25.0), R (>= 3.4.0)"
future NA
gargle "R (>= 3.6)"
gdtools "R (>= 4.0.0)"
generics "R (>= 3.2)"
gert NA
gfonts "R (>= 2.10)"
gganimate "ggplot2 (>= 3.5.0)"
ggdag "R (>= 3.4.0)"
ggeffects "R (>= 3.6)"
ggExtra "R (>= 3.1.0)"
ggforce "ggplot2 (>= 3.3.6), R (>= 3.3.0)"
ggformula "R (>= 4.1), ggplot2 (>= 3.3), scales, ggridges"
ggplot2 "R (>= 3.5)"
ggpubr "R (>= 3.1.0), ggplot2 (>= 3.4.0)"
ggraph "R (>= 2.10), ggplot2 (>= 3.5.0)"
ggrepel "R (>= 3.0.0), ggplot2 (>= 2.2.0)"
ggridges "R (>= 3.2)"
ggsci "R (>= 3.5.0)"
ggsignif NA
gh "R (>= 3.6)"
gifski NA
gitcreds "R (>= 3.4)"
GlobalOptions "R (>= 3.3.0), methods"
globals "R (>= 3.1.2)"
glue "R (>= 3.6)"
googledrive "R (>= 3.6)"
googlesheets4 "R (>= 3.6)"
graphlayouts "R (>= 3.6.0)"
gridExtra NA
groundhog "utils"
gt "R (>= 3.6.0)"
gtable "R (>= 4.0)"
gtools "methods, stats, utils"
gtsummary "R (>= 4.2)"
GWalkR NA
haven "R (>= 3.6)"
here NA
highr "R (>= 3.3.0)"
hms NA
htmlTable "R (>= 4.1)"
htmltools "R (>= 2.14.1)"
htmlwidgets NA
httpcode NA
httpuv "R (>= 2.15.1)"
httr "R (>= 3.5)"
httr2 "R (>= 4.0)"
ids NA
igraph "methods, R (>= 3.5.0)"
ini NA
inline NA
insight "R (>= 3.6)"
installr "R (>= 2.14.0)"
isoband NA
janitor "R (>= 3.1.2)"
jquerylib NA
jsonlite "methods"
jtools "R (>= 3.6.0)"
juicyjuice NA
kableExtra "R (>= 3.1.0)"
KernSmooth "R (>= 2.5.0), stats"
knitr "R (>= 3.6.0)"
labeling NA
labelled "R (>= 3.2)"
languageserver "R (>= 3.4.0)"
later NA
latex2exp NA
lattice "R (>= 4.0.0)"
lazyeval "R (>= 3.1.0)"
librarian "R (>= 3.5.0)"
lifecycle "R (>= 3.6)"
lintr "R (>= 4.0)"
listenv "R (>= 3.1.2)"
lme4 "R (>= 3.6.0), Matrix, methods, stats"
lmerTest "R (>= 3.2.5), lme4 (>= 1.1-10), stats, methods"
lmtest "R (>= 3.0.0), stats, zoo"
lobstr "R (>= 3.2)"
loo "R (>= 3.1.2)"
lpSolve NA
lubridate "methods, R (>= 3.2)"
magick NA
magrittr "R (>= 3.4.0)"
marginaleffects "R (>= 3.6.0)"
markdown "R (>= 2.11.1)"
MASS "R (>= 4.4.0), grDevices, graphics, stats, utils"
Matrix "R (>= 4.4.0), methods"
MatrixModels "R (>= 3.6.0)"
matrixStats "R (>= 3.4.0)"
maxLik "R (>= 2.4.0), miscTools (>= 0.6-8), methods"
memoise NA
mgcv "R (>= 3.6.0), nlme (>= 3.1-64)"
microbenchmark "R (>= 3.2.0)"
migest "R (>= 2.10)"
migration.indices NA
mime NA
miniUI NA
minqa NA
mipfp "cmm, Rsolnp, numDeriv, R(>= 2.10.0)"
miscTools "R (>= 2.14.0)"
mitools NA
modelbased "R (>= 3.6)"
modelr "R (>= 3.2)"
modelsummary "R (>= 4.0.0)"
modeltools "stats, stats4"
mosaic "R (>= 4.1),"
mosaicCore "R (>= 4.1.0)"
mosaicData "R (>= 4.1.0)"
munsell NA
mvtnorm "R(>= 3.5.0)"
nlme "R (>= 3.6.0)"
nloptr NA
nnet "R (>= 3.0.0), stats, utils"
numDeriv "R (>= 2.11.1)"
officer NA
openssl NA
packrat "R (>= 3.0.0)"
pacman "R (>= 3.5.0)"
pak "R (>= 3.5)"
pander "R (>= 2.15.0)"
panelr "R (>= 3.4.0), lme4"
parallelly NA
parameters "R (>= 3.6)"
patchwork NA
pbkrtest "R (>= 4.2.0), lme4 (>= 1.1.31)"
performance "R (>= 3.6)"
pglm "R (>= 2.10), maxLik, plm"
pillar NA
pkgbuild "R (>= 3.5)"
pkgconfig NA
pkgdown "R (>= 4.0.0)"
pkgload "R (>= 3.4.0)"
PKI "R (>= 2.9.0), base64enc"
plm "R (>= 3.2.0)"
plyr "R (>= 3.1.0)"
png "R (>= 2.9.0)"
polyclip "R (>= 3.5.0)"
polynom NA
poorman "R (>= 3.3)"
posterior "R (>= 3.2.0)"
praise NA
prettyunits "R(>= 2.10)"
processx "R (>= 3.4.0)"
profvis "R (>= 4.0)"
progress "R (>= 3.6)"
promises NA
proxy "R (>= 3.4.0)"
pryr "R (>= 3.1.0)"
ps "R (>= 3.4)"
purrr "R (>= 3.5.0)"
quantreg "R (>= 3.5), stats, SparseM"
QuickJSR NA
R.cache "R (>= 2.14.0)"
R.methodsS3 "R (>= 2.13.0)"
R.oo "R (>= 2.13.0), R.methodsS3 (>= 1.8.2)"
R.utils "R (>= 2.14.0), R.oo"
R6 "R (>= 3.6)"
ragg NA
rappdirs "R (>= 3.2)"
rapportools NA
rbibutils "R (>= 2.10)"
rcmdcheck NA
RColorBrewer "R (>= 2.0.0)"
Rcpp NA
RcppArmadillo "R (>= 3.3.0)"
RcppEigen "R (>= 3.6.0)"
RcppParallel "R (>= 3.0.2)"
Rdpack "R (>= 2.15.0), methods"
reactable "R (>= 3.1)"
reactR NA
readr "R (>= 3.6)"
readxl "R (>= 3.6)"
reformulas NA
rematch NA
rematch2 NA
remotes "R (>= 3.0.0)"
renv NA
report "R (>= 3.6)"
repr "R (>= 3.0.1)"
reprex "R (>= 3.6)"
reshape2 "R (>= 3.1)"
rex NA
rio "R (>= 4.0)"
rJava "R (>= 3.6.0), methods"
rlang "R (>= 3.5.0)"
rmarkdown "R (>= 3.0)"
rmsfact NA
roxygen2 "R (>= 3.6)"
rpart "R (>= 2.15.0), graphics, stats, grDevices"
rprojroot "R (>= 3.0.0)"
rsconnect "R (>= 3.5.0)"
Rsolnp "R (>= 2.10.0)"
rstan "R (>= 3.4.0), StanHeaders (>= 2.32.0)"
rstanarm "R (>= 3.4.0), Rcpp (>= 0.12.0), methods"
rstantools NA
rstatix "R (>= 3.3.0)"
rstudioapi NA
rversions NA
rvest "R (>= 3.6)"
s2 "R (>= 3.0.0)"
sandwich "R (>= 3.0.0)"
sass NA
scales "R (>= 3.6)"
see "graphics, grDevices, R (>= 4.0), stats"
selectr "R (>= 3.0)"
sessioninfo "R (>= 3.4)"
sf "methods, R (>= 3.3.0)"
shape "R (>= 2.01)"
shiny "R (>= 3.0.2), methods"
shinycssloaders "R (>= 3.1)"
shinyjs "R (>= 3.1.0)"
shinystan "R (>= 3.1.0), shiny (>= 1.0.3)"
shinythemes "R (>= 3.0.0)"
sjlabelled "R (>= 3.4)"
sjmisc "R (>= 3.4)"
sjPlot "R (>= 3.6)"
sjstats "R (>= 3.4), utils"
skimr "R (>= 3.1.2)"
snakecase "R (>= 3.2)"
softbib "R (>= 3.5.0)"
sourcetools "R (>= 3.0.2)"
SparseM "R (>= 2.15), methods"
spatial "R (>= 3.0.0), graphics, stats, utils"
StanHeaders "R (>= 3.4.0)"
statmod "R (>= 3.0.0)"
stringi "R (>= 3.4)"
stringr "R (>= 3.6)"
styler "R (>= 3.6.0)"
summarytools "R (>= 3.5)"
survey "R (>= 4.1.0), grid, methods, Matrix, survival"
survival "R (>= 3.5.0)"
svglite "R (>= 3.5.0)"
sys NA
systemfonts "R (>= 3.2.0)"
tables "R (>= 2.12.0)"
tabulapdf NA
tensorA "R (>= 2.2.0), stats"
testthat "R (>= 3.6.0)"
textshaping "R (>= 3.2.0)"
threejs "R (>= 3.0.0), igraph (>= 1.0.0)"
tibble "R (>= 3.4.0)"
tidygraph NA
tidyr "R (>= 3.6)"
tidyselect "R (>= 3.4)"
tidyverse "R (>= 3.3)"
timechange "R (>= 3.3)"
tinyplot "R (>= 4.0)"
tinytable "R (>= 4.1.0)"
tinytex NA
transformr NA
triebeard NA
truncnorm "R (>= 3.4.0)"
tweenr "R (>= 3.2.0)"
tzdb "R (>= 3.5.0)"
units "R (>= 3.0.2)"
urlchecker "R (>= 3.3)"
urltools "R (>= 2.10)"
usethis "R (>= 3.6)"
utf8 "R (>= 2.10)"
uuid "R (>= 2.9.0)"
V8 NA
vctrs "R (>= 3.5.0)"
viridis "R (>= 2.10), viridisLite (>= 0.4.0)"
viridisLite "R (>= 2.10)"
vroom "R (>= 3.6)"
waldo "R (>= 4.0)"
whisker NA
withr "R (>= 3.6.0)"
wk "R (>= 2.10)"
writexl NA
xfun "R (>= 3.2.0)"
xml2 "R (>= 3.6.0)"
xmlparsedata "R (>= 3.0.0)"
xopen "R (>= 3.1)"
xtable "R (>= 2.10.0)"
xts "R (>= 3.6.0), zoo (>= 1.7-12)"
yaml NA
zip NA
zoo "R (>= 3.1.0), stats"
base NA
boot "R (>= 3.0.0), graphics, stats"
class "R (>= 3.0.0), stats, utils"
cluster "R (>= 3.5.0)"
codetools "R (>= 2.1)"
compiler NA
datasets NA
foreign "R (>= 4.0.0)"
graphics NA
grDevices NA
grid NA
KernSmooth "R (>= 2.5.0), stats"
lattice "R (>= 4.0.0)"
MASS "R (>= 4.4.0), grDevices, graphics, stats, utils"
Matrix "R (>= 4.4.0), methods"
methods NA
mgcv "R (>= 3.6.0), nlme (>= 3.1-64)"
nlme "R (>= 3.6.0)"
nnet "R (>= 3.0.0), stats, utils"
parallel NA
rpart "R (>= 2.15.0), graphics, stats, grDevices"
spatial "R (>= 3.0.0), graphics, stats, utils"
splines NA
stats NA
stats4 NA
survival "R (>= 3.5.0)"
tcltk NA
tools NA
translations NA
utils NA
Imports
abind "methods, utils"
archive "cli, glue, rlang, tibble"
askpass "sys (>= 2.1)"
av "graphics"
backports NA
base64enc NA
bayesplot "dplyr (>= 0.8.0), ggplot2 (>= 3.4.0), ggridges (>= 0.5.5),\nglue, posterior, reshape2, rlang (>= 0.3.0), stats, tibble (>=\n2.0.0), tidyselect, utils"
bayestestR "insight (>= 1.0.1), datawizard (>= 1.0.0), graphics, methods,\nstats, utils"
bdsmatrix NA
betareg "graphics, grDevices, methods, stats, flexmix, Formula, lmtest,\nmodeltools, sandwich"
BH NA
bibtex "backports (>= 1.4.0), utils"
bigD NA
BiocManager "utils"
BiocVersion NA
bit NA
bit64 "graphics, methods, stats, utils"
bitops NA
blob "methods, rlang, vctrs (>= 0.2.1)"
brew NA
brio NA
broom "backports, dplyr (>= 1.0.0), generics (>= 0.0.2), glue,\nlifecycle, purrr, rlang, stringr, tibble (>= 3.0.0), tidyr (>=\n1.0.0)"
broom.mixed "broom, coda, dplyr, forcats, methods, nlme, purrr, stringr,\ntibble, tidyr, furrr"
bslib "base64enc, cachem, fastmap (>= 1.1.1), grDevices, htmltools\n(>= 0.5.8), jquerylib (>= 0.1.3), jsonlite, lifecycle, memoise\n(>= 2.0.1), mime, rlang, sass (>= 0.4.9)"
cachem "rlang, fastmap (>= 1.2.0)"
calibrate NA
callr "processx (>= 3.6.1), R6, utils"
car "abind, Formula, MASS, mgcv, nnet, pbkrtest (>= 0.4-4),\nquantreg, grDevices, utils, stats, graphics, lme4 (>=\n1.1-27.1), nlme, scales"
carData NA
cards "cli (>= 3.6.1), dplyr (>= 1.1.2), glue (>= 1.6.2), lifecycle\n(>= 1.0.3), rlang (>= 1.1.1), tidyr (>= 1.3.0), tidyselect (>=\n1.2.0)"
cellranger "rematch, tibble"
checkmate "backports (>= 1.1.0), utils"
circlize "GlobalOptions (>= 0.1.2), shape, grDevices, utils, stats,\ncolorspace, methods, grid"
class "MASS"
classInt "grDevices, stats, graphics, e1071, class, KernSmooth"
cli "utils"
clipr "utils"
cluster "graphics, grDevices, stats, utils"
cmm NA
coda "lattice"
collapse "Rcpp (>= 1.0.1)"
collections NA
colorspace "graphics, grDevices, stats"
colourpicker "ggplot2, htmltools, htmlwidgets (>= 0.7), jsonlite, miniUI (>=\n0.1.1), shiny (>= 0.11.1), shinyjs (>= 2.0.0), utils"
commonmark NA
conflicted "cli (>= 3.4.0), memoise, rlang (>= 1.0.0)"
correlation "bayestestR (>= 0.15.0), datasets, datawizard (>= 0.13.0),\ninsight (>= 0.20.5), parameters (>= 0.22.2), stats"
corrplot NA
countrycode NA
cowplot "ggplot2 (>= 3.4.0), grid, gtable, grDevices, methods, rlang,\nscales"
cowsay "crayon, rlang"
cpp11 NA
crayon "grDevices, methods, utils"
credentials "openssl (>= 1.3), sys (>= 2.1), curl, jsonlite, askpass"
crosstalk "htmltools (>= 0.3.6), jsonlite, lazyeval, R6"
crul "curl (>= 3.3), R6 (>= 2.2.0), urltools (>= 1.6.0), httpcode\n(>= 0.2.0), jsonlite, mime"
curl NA
cyclocomp "callr, crayon, desc, remotes, withr"
dagitty "V8, jsonlite, boot, MASS, methods, grDevices, stats, utils,\ngraphics"
data.table "methods"
dataverse "checkmate, httr, jsonlite, readr, stats, utils, xml2"
datawizard "insight (>= 1.0.0), stats, utils"
DBI NA
dbplyr "blob (>= 1.2.0), cli (>= 3.6.1), DBI (>= 1.1.3), dplyr (>=\n1.1.2), glue (>= 1.6.2), lifecycle (>= 1.0.3), magrittr,\nmethods, pillar (>= 1.9.0), purrr (>= 1.0.1), R6 (>= 2.2.2),\nrlang (>= 1.1.1), tibble (>= 3.2.1), tidyr (>= 1.3.0),\ntidyselect (>= 1.2.1), utils, vctrs (>= 0.6.3), withr (>=\n2.5.0)"
Deriv "methods"
desc "cli, R6, utils"
devtools "cli (>= 3.3.0), desc (>= 1.4.1), ellipsis (>= 0.3.2), fs (>=\n1.5.2), lifecycle (>= 1.0.1), memoise (>= 2.0.1), miniUI (>=\n0.1.1.1), pkgbuild (>= 1.3.1), pkgdown (>= 2.0.6), pkgload (>=\n1.3.0), profvis (>= 0.3.7), rcmdcheck (>= 1.4.0), remotes (>=\n2.4.2), rlang (>= 1.0.4), roxygen2 (>= 7.2.1), rversions (>=\n2.1.1), sessioninfo (>= 1.2.2), stats, testthat (>= 3.1.5),\ntools, urlchecker (>= 1.0.1), utils, withr (>= 2.5.0)"
diffobj "crayon (>= 1.3.2), tools, methods, utils, stats"
digest "utils"
distributional "vctrs (>= 0.3.0), rlang (>= 0.4.5), generics, stats, numDeriv,\nutils, lifecycle, pillar"
doBy "boot, broom, cowplot, Deriv, dplyr, ggplot2, MASS, Matrix,\nmodelr, microbenchmark, rlang, tibble, tidyr,"
downlit "brio, desc, digest, evaluate, fansi, memoise, rlang, vctrs,\nwithr, yaml"
dplyr "cli (>= 3.4.0), generics, glue (>= 1.3.2), lifecycle (>=\n1.0.3), magrittr (>= 1.5), methods, pillar (>= 1.9.0), R6,\nrlang (>= 1.1.0), tibble (>= 3.2.0), tidyselect (>= 1.2.0),\nutils, vctrs (>= 0.6.4)"
DT "htmltools (>= 0.3.6), htmlwidgets (>= 1.3), httpuv, jsonlite\n(>= 0.9.16), magrittr, crosstalk, jquerylib, promises"
dtplyr "cli (>= 3.4.0), data.table (>= 1.13.0), dplyr (>= 1.1.0),\nglue, lifecycle, rlang (>= 1.0.4), tibble, tidyselect (>=\n1.2.0), vctrs (>= 0.4.1)"
duckdb "methods, utils"
dygraphs "magrittr, htmlwidgets (>= 0.6), htmltools (>= 0.3.5), zoo (>=\n1.7-10), xts (>= 0.9-7)"
e1071 "graphics, grDevices, class, stats, methods, utils, proxy"
easystats "bayestestR (>= 0.15.1), correlation (>= 0.8.6), datawizard (>=\n1.0.0), effectsize (>= 1.0.0), insight (>= 1.0.1), modelbased\n(>= 0.9.0), parameters (>= 0.24.1), performance (>= 0.13.0),\nreport (>= 0.6.0), see (>= 0.10.0), tools, utils"
effectsize "bayestestR (>= 0.15.0), insight (>= 1.0.0), parameters (>=\n0.24.0), performance (>= 0.12.4), datawizard (>= 0.13.0),\nstats, utils"
ellipsis "rlang (>= 0.3.0)"
emmeans "estimability (>= 1.4.1), graphics, methods, numDeriv, stats,\nutils, mvtnorm"
emptyRpackage "fortunes"
estimability NA
evaluate NA
fansi "grDevices, utils"
farver NA
fastmap NA
flexmix "graphics, grid, grDevices, methods, modeltools (>= 0.2-16),\nnnet, stats, stats4, utils"
flextable "data.table (>= 1.13.0), gdtools (>= 0.4.0), graphics,\ngrDevices, grid, htmltools, knitr, officer (>= 0.6.7), ragg,\nrlang, rmarkdown (>= 2.0), stats, utils, uuid (>= 0.1-4), xml2"
fontawesome "rlang (>= 1.0.6), htmltools (>= 0.5.1.1)"
fontBitstreamVera NA
fontLiberation NA
fontquiver "fontBitstreamVera (>= 0.1.0), fontLiberation (>= 0.1.0)"
forcats "cli (>= 3.4.0), glue, lifecycle, magrittr, rlang (>= 1.0.0),\ntibble"
foreign "methods, utils, stats"
Formula NA
fortunes "utils"
fs "methods"
furrr "globals (>= 0.14.0), lifecycle (>= 1.0.1), purrr (>= 0.3.4),\nrlang (>= 1.0.2), vctrs (>= 0.4.1)"
future "digest, globals (>= 0.16.1), listenv (>= 0.8.0), parallel,\nparallelly (>= 1.38.0), utils"
gargle "cli (>= 3.0.1), fs (>= 1.3.1), glue (>= 1.3.0), httr (>=\n1.4.5), jsonlite, lifecycle, openssl, rappdirs, rlang (>=\n1.1.0), stats, utils, withr"
gdtools "fontquiver (>= 0.2.0), htmltools, Rcpp (>= 0.12.12),\nsystemfonts (>= 1.1.0), tools"
generics "methods"
gert "askpass, credentials (>= 1.2.1), openssl (>= 2.0.3),\nrstudioapi (>= 0.11), sys, zip (>= 2.1.0)"
gfonts "utils, htmltools, shiny, crul, jsonlite, glue, crayon"
gganimate "cli, glue, grDevices, grid, lifecycle, progress, rlang,\nscales, stringi, transformr (>= 0.1.5), tweenr (>= 2.0.3),\nutils, vctrs"
ggdag "dagitty, dplyr, forcats, ggplot2 (>= 3.0.0), ggraph (>=\n2.0.0), ggrepel, igraph, magrittr, pillar, purrr, rlang,\nstringr, tibble, tidygraph"
ggeffects "graphics, insight (>= 1.0.1), datawizard (>= 1.0.0), stats,\nutils"
ggExtra "colourpicker (>= 1.0), ggplot2 (>= 2.2.0), grDevices, grid (>=\n3.1.3), gtable (>= 0.2.0), miniUI (>= 0.1.1), scales (>=\n0.2.0), shiny (>= 0.13.0), shinyjs (>= 0.5.2), utils, R6"
ggforce "Rcpp (>= 0.12.2), grid, scales, MASS, tweenr (>= 0.1.5),\ngtable, rlang, polyclip, stats, grDevices, tidyselect, withr,\nutils, lifecycle, cli, vctrs, systemfonts"
ggformula "mosaicCore (>= 0.7.0), rlang, tibble, stringr, grid, labelled"
ggplot2 "cli, glue, grDevices, grid, gtable (>= 0.1.1), isoband,\nlifecycle (> 1.0.1), MASS, mgcv, rlang (>= 1.1.0), scales (>=\n1.3.0), stats, tibble, vctrs (>= 0.6.0), withr (>= 2.5.0)"
ggpubr "ggrepel (>= 0.9.2), grid, ggsci, stats, utils, tidyr (>=\n1.3.0), purrr, dplyr (>= 0.7.1), cowplot (>= 1.1.1), ggsignif,\nscales, gridExtra, glue, polynom, rlang (>= 0.4.6), rstatix (>=\n0.7.2), tibble, magrittr"
ggraph "dplyr, ggforce (>= 0.3.1), grid, igraph (>= 1.0.0), scales,\nMASS, ggrepel, utils, stats, viridis, rlang, tidygraph,\ngraphlayouts (>= 1.1.0), withr, cli, vctrs, lifecycle, memoise"
ggrepel "grid, Rcpp, rlang (>= 0.3.0), scales (>= 0.5.0), withr (>=\n2.5.0)"
ggridges "ggplot2 (>= 3.4.0), grid (>= 3.0.0), scales (>= 0.4.1), withr\n(>= 2.1.1)"
ggsci "ggplot2 (>= 2.0.0), grDevices, scales"
ggsignif "ggplot2 (>= 3.3.5)"
gh "cli (>= 3.0.1), gitcreds, glue, httr2, ini, jsonlite,\nlifecycle, rlang (>= 1.0.0)"
gifski NA
gitcreds NA
GlobalOptions "utils"
globals "codetools"
glue "methods"
googledrive "cli (>= 3.0.0), gargle (>= 1.5.0), glue (>= 1.4.2), httr,\njsonlite, lifecycle, magrittr, pillar (>= 1.9.0), purrr (>=\n1.0.1), rlang (>= 1.0.2), tibble (>= 2.0.0), utils, uuid, vctrs\n(>= 0.3.0), withr"
googlesheets4 "cellranger, cli (>= 3.0.0), curl, gargle (>= 1.5.0), glue (>=\n1.3.0), googledrive (>= 2.1.0), httr, ids, lifecycle, magrittr,\nmethods, purrr, rematch2, rlang (>= 1.0.2), tibble (>= 2.1.1),\nutils, vctrs (>= 0.2.3), withr"
graphlayouts "igraph (>= 2.0.0), Rcpp"
gridExtra "gtable, grid, grDevices, graphics, utils"
groundhog "methods"
gt "base64enc (>= 0.1-3), bigD (>= 0.2), bitops (>= 1.0-7), cli\n(>= 3.6.3), commonmark (>= 1.9.1), dplyr (>= 1.1.4), fs (>=\n1.6.4), glue (>= 1.8.0), htmltools (>= 0.5.8.1), htmlwidgets\n(>= 1.6.4), juicyjuice (>= 0.1.0), magrittr (>= 2.0.3),\nmarkdown (>= 1.13), reactable (>= 0.4.4), rlang (>= 1.1.4),\nsass (>= 0.4.9), scales (>= 1.3.0), tidyselect (>= 1.2.1),\nvctrs, xml2 (>= 1.3.6)"
gtable "cli, glue, grid, lifecycle, rlang (>= 1.1.0), stats"
gtools NA
gtsummary "cards (>= 0.5.0), cli (>= 3.6.3), dplyr (>= 1.1.3), glue (>=\n1.8.0), gt (>= 0.11.1), lifecycle (>= 1.0.3), rlang (>= 1.1.1),\ntidyr (>= 1.3.0), vctrs (>= 0.6.4)"
GWalkR "htmlwidgets, jsonlite, openssl, shiny, shinycssloaders, DBI,\nduckdb"
haven "cli (>= 3.0.0), forcats (>= 0.2.0), hms, lifecycle, methods,\nreadr (>= 0.1.0), rlang (>= 0.4.0), tibble, tidyselect, vctrs\n(>= 0.3.0)"
here "rprojroot (>= 2.0.2)"
highr "xfun (>= 0.18)"
hms "lifecycle, methods, pkgconfig, rlang (>= 1.0.2), vctrs (>=\n0.3.8)"
htmlTable "stringr, knitr (>= 1.6), magrittr (>= 1.5), methods,\ncheckmate, htmlwidgets, htmltools, rstudioapi (>= 0.6)"
htmltools "base64enc, digest, fastmap (>= 1.1.0), grDevices, rlang (>=\n1.0.0), utils"
htmlwidgets "grDevices, htmltools (>= 0.5.7), jsonlite (>= 0.9.16), knitr\n(>= 1.8), rmarkdown, yaml"
httpcode NA
httpuv "later (>= 0.8.0), promises, R6, Rcpp (>= 1.0.7), utils"
httr "curl (>= 5.0.2), jsonlite, mime, openssl (>= 0.8), R6"
httr2 "cli (>= 3.0.0), curl (>= 6.1.0), glue, lifecycle, magrittr,\nopenssl, R6, rappdirs, rlang (>= 1.1.0), vctrs (>= 0.6.3),\nwithr"
ids "openssl, uuid"
igraph "cli, graphics, grDevices, lifecycle, magrittr, Matrix,\npkgconfig (>= 2.0.0), rlang, stats, utils, vctrs"
ini NA
inline "methods"
insight "methods, stats, utils"
installr "stringr, utils"
isoband "grid, utils"
janitor "dplyr (>= 1.0.0), hms, lifecycle, lubridate, magrittr, purrr,\nrlang, stringi, stringr, snakecase (>= 0.9.2), tidyselect (>=\n1.0.0), tidyr (>= 0.7.0)"
jquerylib "htmltools"
jsonlite NA
jtools "cli, generics, broom, broom.mixed, ggplot2 (>= 3.4.0),\nmagrittr, pander, pkgconfig, rlang, sandwich, tibble"
juicyjuice "V8 (>= 4.2.0)"
kableExtra "knitr (>= 1.33), magrittr, stringr (>= 1.0), xml2 (>= 1.1.1),\nrmarkdown (>= 1.6.0), scales, viridisLite, stats, grDevices,\nhtmltools, rstudioapi, tools, digest, graphics, svglite"
KernSmooth NA
knitr "evaluate (>= 0.15), highr (>= 0.11), methods, tools, xfun (>=\n0.48), yaml (>= 2.1.19)"
labeling "stats, graphics"
labelled "haven (>= 2.4.1), cli, dplyr (>= 1.1.0), lifecycle, rlang (>=\n1.1.0), vctrs, stringr, tidyr, tidyselect"
languageserver "callr (>= 3.0.0), collections (>= 0.3.0), fs (>= 1.3.1),\njsonlite (>= 1.6), lintr (>= 3.0.0), parallel, R6 (>= 2.4.1),\nroxygen2 (>= 7.0.0), stringi (>= 1.1.7), styler (>= 1.5.1),\ntools, utils, xml2 (>= 1.2.2), xmlparsedata (>= 1.0.3)"
later "Rcpp (>= 0.12.9), rlang"
latex2exp "stringr, magrittr"
lattice "grid, grDevices, graphics, stats, utils"
lazyeval NA
librarian "BiocManager, remotes, tools, utils"
lifecycle "cli (>= 3.4.0), glue, rlang (>= 1.1.0)"
lintr "backports (>= 1.4.0), cli (>= 3.4.0), codetools, digest, glue,\nknitr, rex, stats, utils, xml2 (>= 1.0.0), xmlparsedata (>=\n1.0.5)"
listenv NA
lme4 "graphics, grid, splines, utils, parallel, MASS, lattice, boot,\nnlme (>= 3.1-123), minqa (>= 1.1.15), nloptr (>= 1.0.4),\nreformulas (>= 0.3.0)"
lmerTest "numDeriv, MASS, ggplot2"
lmtest "graphics"
lobstr "crayon, methods, prettyunits, rlang (>= 1.0.0)"
loo "checkmate, matrixStats (>= 0.52), parallel, posterior (>=\n1.5.0), stats"
lpSolve NA
lubridate "generics, timechange (>= 0.3.0)"
magick "Rcpp (>= 0.12.12), magrittr, curl"
magrittr NA
marginaleffects "checkmate, data.table (>= 1.16.4), generics, insight (>=\n0.20.3), methods, rlang, Rcpp (>= 1.0.0)"
markdown "utils, commonmark (>= 1.9.0), xfun (>= 0.38)"
MASS "methods"
Matrix "grDevices, graphics, grid, lattice, stats, utils"
MatrixModels "stats, methods, Matrix (>= 1.6-0)"
matrixStats NA
maxLik "sandwich, generics"
memoise "rlang (>= 0.4.10), cachem"
mgcv "methods, stats, graphics, Matrix, splines, utils"
microbenchmark "graphics, stats"
migest "dplyr, purrr, tidyr, stringr, magrittr, stats, tibble,\nforcats, utils, matrixStats, migration.indices, circlize,\ngraphics, grDevices, mipfp"
migration.indices "calibrate"
mime "tools"
miniUI "shiny (>= 0.13), htmltools (>= 0.3), utils"
minqa "Rcpp (>= 0.9.10)"
mipfp NA
miscTools "digest"
mitools "DBI, methods, stats"
modelbased "bayestestR (>= 0.15.1), datawizard (>= 1.0.0), insight (>=\n1.0.1), parameters (>= 0.24.1), graphics, stats, tools, utils"
modelr "broom, magrittr, purrr (>= 0.2.2), rlang (>= 1.0.6), tibble,\ntidyr (>= 0.8.0), tidyselect, vctrs"
modelsummary "checkmate (>= 2.3.1), data.table (>= 1.16.4), generics, glue,\ninsight (>= 1.0.1), methods, parameters (>= 0.24.1),\nperformance (>= 0.13.0), tables (>= 0.9.31), tinytable (>=\n0.7.0)"
modeltools "methods"
mosaic "dplyr, tibble, lattice (>= 0.20-21), ggformula, mosaicData,\nMatrix, mosaicCore (>= 0.7.0), ggplot2, rlang (>= 0.4.7),\npurrr, MASS, grid, tidyr, methods, utils"
mosaicCore "stats, dplyr, rlang, tidyr, MASS"
mosaicData NA
munsell "colorspace, methods"
mvtnorm "stats"
nlme "graphics, stats, utils, lattice"
nloptr NA
nnet NA
numDeriv NA
officer "cli, graphics, grDevices, openssl, R6, ragg, stats, utils,\nuuid, xml2 (>= 1.1.0), zip (>= 2.1.0)"
openssl "askpass"
packrat "tools, utils"
pacman "remotes, methods, stats, utils"
pak "tools, utils"
pander "grDevices, graphics, methods, utils, stats, digest, tools,\nRcpp"
panelr "crayon, dplyr, Formula, ggplot2, jtools (>= 2.0.1), lmerTest,\nmagrittr, methods, purrr, rlang (>= 0.3.0), stringr, tibble (>=\n2.0.0), tidyr (>= 0.8.3)"
parallelly "parallel, tools, utils"
parameters "bayestestR (>= 0.15.0), datawizard (>= 1.0.0), insight (>=\n1.0.0), graphics, methods, stats, utils"
patchwork "ggplot2 (>= 3.0.0), gtable, grid, stats, grDevices, utils,\ngraphics, rlang (>= 1.0.0), cli, farver"
pbkrtest "broom, dplyr, MASS, methods, numDeriv, Matrix (>= 1.2.3), doBy"
performance "bayestestR (>= 0.15.0), insight (>= 1.0.0), datawizard (>=\n0.13.0), stats, utils"
pglm "statmod, Formula"
pillar "cli (>= 2.3.0), glue, lifecycle, rlang (>= 1.0.2), utf8 (>=\n1.1.0), utils, vctrs (>= 0.5.0)"
pkgbuild "callr (>= 3.2.0), cli (>= 3.4.0), desc, processx, R6"
pkgconfig "utils"
pkgdown "bslib (>= 0.5.1), callr (>= 3.7.3), cli (>= 3.6.1), desc (>=\n1.4.0), digest, downlit (>= 0.4.4), fontawesome, fs (>= 1.4.0),\nhttr2 (>= 1.0.2), jsonlite, openssl, purrr (>= 1.0.0), ragg,\nrlang (>= 1.1.0), rmarkdown (>= 2.27), tibble, whisker, withr\n(>= 2.4.3), xml2 (>= 1.3.1), yaml"
pkgload "cli (>= 3.3.0), desc, fs, glue, lifecycle, methods, pkgbuild,\nprocessx, rlang (>= 1.1.1), rprojroot, utils, withr (>= 2.4.3)"
PKI NA
plm "MASS, bdsmatrix, collapse (>= 1.8.9), zoo, nlme, sandwich,\nlattice, lmtest, maxLik, Rdpack, Formula, stats"
plyr "Rcpp (>= 0.11.0)"
png NA
polyclip NA
polynom "stats, graphics"
poorman NA
posterior "methods, abind, checkmate, rlang (>= 1.0.6), stats, tibble (>=\n3.1.0), vctrs (>= 0.5.0), tensorA, pillar, distributional,\nparallel, matrixStats"
praise NA
prettyunits NA
processx "ps (>= 1.2.0), R6, utils"
profvis "htmlwidgets (>= 0.3.2), rlang (>= 1.1.0), vctrs"
progress "crayon, hms, prettyunits, R6"
promises "fastmap (>= 1.1.0), later, magrittr (>= 1.5), R6, Rcpp, rlang,\nstats"
proxy "stats, utils"
pryr "codetools, lobstr, methods, Rcpp (>= 0.11.0), stringr"
ps "utils"
purrr "cli (>= 3.6.1), lifecycle (>= 1.0.3), magrittr (>= 1.5.0),\nrlang (>= 1.1.1), vctrs (>= 0.6.3)"
quantreg "methods, graphics, Matrix, MatrixModels, survival, MASS"
QuickJSR NA
R.cache "utils, R.methodsS3 (>= 1.8.1), R.oo (>= 1.24.0), R.utils (>=\n2.10.1), digest (>= 0.6.13)"
R.methodsS3 "utils"
R.oo "methods, utils"
R.utils "methods, utils, tools, R.methodsS3"
R6 NA
ragg "systemfonts (>= 1.0.3), textshaping (>= 0.3.0)"
rappdirs NA
rapportools "plyr, pander, reshape2, MASS"
rbibutils "utils, tools"
rcmdcheck "callr (>= 3.1.1.9000), cli (>= 3.0.0), curl, desc (>= 1.2.0),\ndigest, pkgbuild, prettyunits, R6, rprojroot, sessioninfo (>=\n1.1.1), utils, withr, xopen"
RColorBrewer NA
Rcpp "methods, utils"
RcppArmadillo "Rcpp (>= 1.0.12), stats, utils, methods"
RcppEigen "Rcpp (>= 0.11.0), stats, utils"
RcppParallel NA
Rdpack "tools, utils, rbibutils (>= 1.3)"
reactable "digest, htmltools (>= 0.5.2), htmlwidgets (>= 1.5.3),\njsonlite, reactR"
reactR "htmltools"
readr "cli (>= 3.2.0), clipr, crayon, hms (>= 0.4.1), lifecycle (>=\n0.2.0), methods, R6, rlang, tibble, utils, vroom (>= 1.6.0)"
readxl "cellranger, tibble (>= 2.0.1), utils"
reformulas "stats, methods, Matrix, Rdpack"
rematch NA
rematch2 "tibble"
remotes "methods, stats, tools, utils"
renv "utils"
report "bayestestR (>= 0.15.0), effectsize (>= 1.0.0), insight (>=\n1.0.1), parameters (>= 0.24.1), performance (>= 0.13.0),\ndatawizard (>= 1.0.0), stats, tools, utils"
repr "utils, grDevices, htmltools, jsonlite, pillar (>= 1.4.0),\nbase64enc"
reprex "callr (>= 3.6.0), cli (>= 3.2.0), clipr (>= 0.4.0), fs, glue,\nknitr (>= 1.23), lifecycle, rlang (>= 1.0.0), rmarkdown,\nrstudioapi, utils, withr (>= 2.3.0)"
reshape2 "plyr (>= 1.8.1), Rcpp, stringr"
rex "lazyeval"
rio "tools, stats, utils, foreign, haven (>= 1.1.2), curl (>= 0.6),\ndata.table (>= 1.11.2), readxl (>= 0.1.1), tibble, writexl,\nlifecycle, R.utils, readr"
rJava NA
rlang "utils"
rmarkdown "bslib (>= 0.2.5.1), evaluate (>= 0.13), fontawesome (>=\n0.5.0), htmltools (>= 0.5.1), jquerylib, jsonlite, knitr (>=\n1.43), methods, tinytex (>= 0.31), tools, utils, xfun (>=\n0.36), yaml (>= 2.1.19)"
rmsfact NA
roxygen2 "brew, cli (>= 3.3.0), commonmark, desc (>= 1.2.0), knitr,\nmethods, pkgload (>= 1.0.2), purrr (>= 1.0.0), R6 (>= 2.1.2),\nrlang (>= 1.0.6), stringi, stringr (>= 1.0.0), utils, withr,\nxml2"
rpart NA
rprojroot NA
rsconnect "cli, curl, digest, jsonlite, lifecycle, openssl (>= 2.0.0),\nPKI, packrat (>= 0.6), renv (>= 1.0.0), rlang (>= 1.0.0),\nrstudioapi (>= 0.5), tools, yaml (>= 2.1.5)"
Rsolnp "truncnorm, parallel, stats"
rstan "methods, stats4, inline (>= 0.3.19), gridExtra (>= 2.3), Rcpp\n(>= 1.0.7), RcppParallel (>= 5.1.4), loo (>= 2.4.1), pkgbuild\n(>= 1.2.0), QuickJSR, ggplot2 (>= 3.3.5)"
rstanarm "bayesplot (>= 1.7.0), ggplot2 (>= 2.2.1), lme4 (>= 1.1-8), loo\n(>= 2.1.0), Matrix (>= 1.2-13), nlme (>= 3.1-124), posterior,\nrstan (>= 2.32.0), rstantools (>= 2.1.0), shinystan (>= 2.3.0),\nstats, survival (>= 2.40.1), RcppParallel (>= 5.0.1), utils"
rstantools "desc, stats, utils, Rcpp (>= 0.12.16), RcppParallel (>= 5.0.1)"
rstatix "stats, utils, tidyr (>= 1.0.0), purrr, broom (>= 0.7.4), rlang\n(>= 0.3.1), tibble (>= 2.1.3), dplyr (>= 0.7.1), magrittr,\ncorrplot, tidyselect (>= 1.2.0), car, generics (>= 0.0.2)"
rstudioapi NA
rversions "curl, utils, xml2 (>= 1.0.0)"
rvest "cli, glue, httr (>= 0.5), lifecycle (>= 1.0.3), magrittr,\nrlang (>= 1.1.0), selectr, tibble, xml2 (>= 1.3)"
s2 "Rcpp, wk (>= 0.6.0)"
sandwich "stats, utils, zoo"
sass "fs (>= 1.2.4), rlang (>= 0.4.10), htmltools (>= 0.5.1), R6,\nrappdirs"
scales "cli, farver (>= 2.0.3), glue, labeling, lifecycle, munsell (>=\n0.5), R6, RColorBrewer, rlang (>= 1.0.0), viridisLite"
see "bayestestR (>= 0.15.1), correlation (>= 0.8.6), datawizard (>=\n1.0.0), effectsize (>= 1.0.0), ggplot2 (>= 3.5.1), insight (>=\n1.0.1), modelbased (>= 0.8.9), patchwork (>= 1.3.0), parameters\n(>= 0.24.1), performance (>= 0.13.0)"
selectr "methods, stringr, R6"
sessioninfo "cli (>= 3.1.0), tools, utils"
sf "classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,\nmagrittr, s2 (>= 1.1.0), stats, tools, units (>= 0.7-0), utils"
shape "stats, graphics, grDevices"
shiny "utils, grDevices, httpuv (>= 1.5.2), mime (>= 0.3), jsonlite\n(>= 0.9.16), xtable, fontawesome (>= 0.4.0), htmltools (>=\n0.5.4), R6 (>= 2.0), sourcetools, later (>= 1.0.0), promises\n(>= 1.3.2), tools, crayon, rlang (>= 0.4.10), fastmap (>=\n1.1.1), withr, commonmark (>= 1.7), glue (>= 1.3.2), bslib (>=\n0.6.0), cachem (>= 1.1.0), lifecycle (>= 0.2.0)"
shinycssloaders "digest, glue, grDevices, htmltools (>= 0.3.5), shiny"
shinyjs "digest (>= 0.6.8), jsonlite, shiny (>= 1.0.0)"
shinystan "bayesplot (>= 1.5.0), colourpicker, DT (>= 0.2), dygraphs (>=\n1.1.1.2), ggplot2 (>= 2.1.1), gridExtra, gtools, markdown (>=\n0.7.4), methods, reshape2, rstan (>= 2.17.1), stats, shinyjs\n(>= 0.6.0), shinythemes (>= 1.0.1), threejs (>= 0.2.1), utils,\nxtable, xts (>= 0.9-7)"
shinythemes "shiny (>= 0.11)"
sjlabelled "insight, datawizard, stats, tools, utils"
sjmisc "dplyr, insight, datawizard, magrittr, methods, purrr, rlang,\nsjlabelled (>= 1.1.1), stats, tidyselect, utils"
sjPlot "graphics, grDevices, stats, utils, bayestestR, datawizard,\ndplyr, ggeffects, ggplot2 (>= 3.2.0), knitr, insight, MASS,\nparameters, performance, purrr, rlang, scales, sjlabelled (>=\n1.1.2), sjmisc (>= 2.8.2), sjstats (>= 0.17.8), tidyr (>=\n1.0.0)"
sjstats "datawizard, effectsize (>= 0.8.8), insight, parameters,\nperformance, stats"
skimr "cli, dplyr (>= 0.8.0), knitr (>= 1.2), magrittr (>= 1.5),\npillar (>= 1.6.4), purrr, repr, rlang (>= 0.3.1), stats,\nstringr (>= 1.1), tibble (>= 2.0.0), tidyr (>= 1.0), tidyselect\n(>= 1.0.0), vctrs"
snakecase "stringr, stringi"
softbib "checkmate, renv, rmarkdown, bibtex"
sourcetools NA
SparseM "graphics, stats, utils"
spatial NA
StanHeaders "RcppParallel (>= 5.1.4)"
statmod "stats, graphics"
stringi "tools, utils, stats"
stringr "cli, glue (>= 1.6.1), lifecycle (>= 1.0.3), magrittr, rlang\n(>= 1.0.0), stringi (>= 1.5.3), vctrs (>= 0.4.0)"
styler "cli (>= 3.1.1), magrittr (>= 2.0.0), purrr (>= 0.2.3), R.cache\n(>= 0.15.0), rlang (>= 1.0.0), rprojroot (>= 1.1), tools, vctrs\n(>= 0.4.1), withr (>= 2.3.0),"
summarytools "base64enc, checkmate, dplyr, grDevices, htmltools, lubridate,\nmagick, matrixStats, methods, pander, pryr, rapportools, stats,\ntcltk, tibble, tidyr, utils"
survey "stats, graphics, splines, lattice, minqa, numDeriv, mitools\n(>= 2.4), Rcpp (>= 0.12.8)"
survival "graphics, Matrix, methods, splines, stats, utils"
svglite "systemfonts (>= 1.0.0)"
sys NA
systemfonts "grid, jsonlite, lifecycle, tools, utils"
tables "stats, utils, knitr, htmltools"
tabulapdf "png, readr, rJava, tools, utils"
tensorA NA
testthat "brio (>= 1.1.3), callr (>= 3.7.3), cli (>= 3.6.1), desc (>=\n1.4.2), digest (>= 0.6.33), evaluate (>= 1.0.1), jsonlite (>=\n1.8.7), lifecycle (>= 1.0.3), magrittr (>= 2.0.3), methods,\npkgload (>= 1.3.2.1), praise (>= 1.0.0), processx (>= 3.8.2),\nps (>= 1.7.5), R6 (>= 2.5.1), rlang (>= 1.1.1), utils, waldo\n(>= 0.6.0), withr (>= 3.0.2)"
textshaping "lifecycle, stats, stringi, systemfonts (>= 1.1.0), utils"
threejs "htmlwidgets (>= 0.3.2), base64enc, crosstalk, methods, stats"
tibble "fansi (>= 0.4.0), lifecycle (>= 1.0.0), magrittr, methods,\npillar (>= 1.8.1), pkgconfig, rlang (>= 1.0.2), utils, vctrs\n(>= 0.4.2)"
tidygraph "cli, dplyr (>= 0.8.5), igraph (>= 2.0.0), lifecycle, magrittr,\npillar, R6, rlang, stats, tibble, tidyr, tools, utils"
tidyr "cli (>= 3.4.1), dplyr (>= 1.0.10), glue, lifecycle (>= 1.0.3),\nmagrittr, purrr (>= 1.0.1), rlang (>= 1.1.1), stringr (>=\n1.5.0), tibble (>= 2.1.1), tidyselect (>= 1.2.0), utils, vctrs\n(>= 0.5.2)"
tidyselect "cli (>= 3.3.0), glue (>= 1.3.0), lifecycle (>= 1.0.3), rlang\n(>= 1.0.4), vctrs (>= 0.5.2), withr"
tidyverse "broom (>= 1.0.3), conflicted (>= 1.2.0), cli (>= 3.6.0),\ndbplyr (>= 2.3.0), dplyr (>= 1.1.0), dtplyr (>= 1.2.2), forcats\n(>= 1.0.0), ggplot2 (>= 3.4.1), googledrive (>= 2.0.0),\ngooglesheets4 (>= 1.0.1), haven (>= 2.5.1), hms (>= 1.1.2),\nhttr (>= 1.4.4), jsonlite (>= 1.8.4), lubridate (>= 1.9.2),\nmagrittr (>= 2.0.3), modelr (>= 0.1.10), pillar (>= 1.8.1),\npurrr (>= 1.0.1), ragg (>= 1.2.5), readr (>= 2.1.4), readxl (>=\n1.4.2), reprex (>= 2.0.2), rlang (>= 1.0.6), rstudioapi (>=\n0.14), rvest (>= 1.0.3), stringr (>= 1.5.0), tibble (>= 3.1.8),\ntidyr (>= 1.3.0), xml2 (>= 1.3.3)"
timechange NA
tinyplot "graphics, grDevices, stats, tools, utils"
tinytable "methods"
tinytex "xfun (>= 0.48)"
transformr "tweenr, rlang, sf, lpSolve, vctrs"
triebeard "Rcpp"
truncnorm NA
tweenr "farver, magrittr, rlang, vctrs"
tzdb NA
units "Rcpp"
urlchecker "cli, curl, tools, xml2"
urltools "Rcpp, methods, triebeard"
usethis "cli (>= 3.0.1), clipr (>= 0.3.0), crayon, curl (>= 2.7), desc\n(>= 1.4.2), fs (>= 1.3.0), gert (>= 1.4.1), gh (>= 1.2.1), glue\n(>= 1.3.0), jsonlite, lifecycle (>= 1.0.0), purrr, rappdirs,\nrlang (>= 1.1.0), rprojroot (>= 1.2), rstudioapi, stats, tools,\nutils, whisker, withr (>= 2.3.0), yaml"
utf8 NA
uuid NA
V8 "Rcpp (>= 0.12.12), jsonlite (>= 1.0), curl (>= 1.0), utils"
vctrs "cli (>= 3.4.0), glue, lifecycle (>= 1.0.3), rlang (>= 1.1.0)"
viridis "ggplot2 (>= 1.0.1), gridExtra"
viridisLite NA
vroom "bit64, cli (>= 3.2.0), crayon, glue, hms, lifecycle (>=\n1.0.3), methods, rlang (>= 0.4.2), stats, tibble (>= 2.0.0),\ntidyselect, tzdb (>= 0.1.1), vctrs (>= 0.2.0), withr"
waldo "cli, diffobj (>= 0.3.4), glue, methods, rlang (>= 1.1.0)"
whisker NA
withr "graphics, grDevices"
wk NA
writexl NA
xfun "grDevices, stats, tools"
xml2 "cli, methods, rlang (>= 1.1.0)"
xmlparsedata NA
xopen "processx"
xtable "stats, utils"
xts "methods"
yaml NA
zip NA
zoo "utils, graphics, grDevices, lattice (>= 0.20-27)"
base NA
boot NA
class "MASS"
cluster "graphics, grDevices, stats, utils"
codetools NA
compiler NA
datasets NA
foreign "methods, utils, stats"
graphics "grDevices"
grDevices NA
grid "grDevices, utils"
KernSmooth NA
lattice "grid, grDevices, graphics, stats, utils"
MASS "methods"
Matrix "grDevices, graphics, grid, lattice, stats, utils"
methods "utils, stats"
mgcv "methods, stats, graphics, Matrix, splines, utils"
nlme "graphics, stats, utils, lattice"
nnet NA
parallel "tools, compiler"
rpart NA
spatial NA
splines "graphics, stats"
stats "utils, grDevices, graphics"
stats4 "graphics, methods, stats"
survival "graphics, Matrix, methods, splines, stats, utils"
tcltk "utils"
tools NA
translations NA
utils NA
LinkingTo
abind NA
archive "cli"
askpass NA
av NA
backports NA
base64enc NA
bayesplot NA
bayestestR NA
bdsmatrix NA
betareg NA
BH NA
bibtex NA
bigD NA
BiocManager NA
BiocVersion NA
bit NA
bit64 NA
bitops NA
blob NA
brew NA
brio NA
broom NA
broom.mixed NA
bslib NA
cachem NA
calibrate NA
callr NA
car NA
carData NA
cards NA
cellranger NA
checkmate NA
circlize NA
class NA
classInt NA
cli NA
clipr NA
cluster NA
cmm NA
coda NA
collapse "Rcpp"
collections NA
colorspace NA
colourpicker NA
commonmark NA
conflicted NA
correlation NA
corrplot NA
countrycode NA
cowplot NA
cowsay NA
cpp11 NA
crayon NA
credentials NA
crosstalk NA
crul NA
curl NA
cyclocomp NA
dagitty NA
data.table NA
dataverse NA
datawizard NA
DBI NA
dbplyr NA
Deriv NA
desc NA
devtools NA
diffobj NA
digest NA
distributional NA
doBy NA
downlit NA
dplyr NA
DT NA
dtplyr NA
duckdb NA
dygraphs NA
e1071 NA
easystats NA
effectsize NA
ellipsis NA
emmeans NA
emptyRpackage NA
estimability NA
evaluate NA
fansi NA
farver NA
fastmap NA
flexmix NA
flextable NA
fontawesome NA
fontBitstreamVera NA
fontLiberation NA
fontquiver NA
forcats NA
foreign NA
Formula NA
fortunes NA
fs NA
furrr NA
future NA
gargle NA
gdtools "Rcpp"
generics NA
gert NA
gfonts NA
gganimate NA
ggdag NA
ggeffects NA
ggExtra NA
ggforce "Rcpp, RcppEigen"
ggformula NA
ggplot2 NA
ggpubr NA
ggraph "cpp11"
ggrepel "Rcpp"
ggridges NA
ggsci NA
ggsignif NA
gh NA
gifski NA
gitcreds NA
GlobalOptions NA
globals NA
glue NA
googledrive NA
googlesheets4 NA
graphlayouts "Rcpp, RcppArmadillo"
gridExtra NA
groundhog NA
gt NA
gtable NA
gtools NA
gtsummary NA
GWalkR NA
haven "cpp11"
here NA
highr NA
hms NA
htmlTable NA
htmltools NA
htmlwidgets NA
httpcode NA
httpuv "later, Rcpp"
httr NA
httr2 NA
ids NA
igraph "cpp11 (>= 0.5.0)"
ini NA
inline NA
insight NA
installr NA
isoband NA
janitor NA
jquerylib NA
jsonlite NA
jtools NA
juicyjuice NA
kableExtra NA
KernSmooth NA
knitr NA
labeling NA
labelled NA
languageserver NA
later "Rcpp"
latex2exp NA
lattice NA
lazyeval NA
librarian NA
lifecycle NA
lintr NA
listenv NA
lme4 "Rcpp (>= 0.10.5), RcppEigen (>= 0.3.3.9.4), Matrix (>=\n1.2-3)"
lmerTest NA
lmtest NA
lobstr "cpp11 (>= 0.4.2)"
loo NA
lpSolve NA
lubridate NA
magick "Rcpp"
magrittr NA
marginaleffects "Rcpp, RcppEigen"
markdown NA
MASS NA
Matrix NA
MatrixModels NA
matrixStats NA
maxLik NA
memoise NA
mgcv NA
microbenchmark NA
migest NA
migration.indices NA
mime NA
miniUI NA
minqa "Rcpp"
mipfp NA
miscTools NA
mitools NA
modelbased NA
modelr NA
modelsummary NA
modeltools NA
mosaic NA
mosaicCore NA
mosaicData NA
munsell NA
mvtnorm NA
nlme NA
nloptr NA
nnet NA
numDeriv NA
officer NA
openssl NA
packrat NA
pacman NA
pak NA
pander "Rcpp"
panelr NA
parallelly NA
parameters NA
patchwork NA
pbkrtest NA
performance NA
pglm NA
pillar NA
pkgbuild NA
pkgconfig NA
pkgdown NA
pkgload NA
PKI NA
plm NA
plyr "Rcpp"
png NA
polyclip NA
polynom NA
poorman NA
posterior NA
praise NA
prettyunits NA
processx NA
profvis NA
progress NA
promises "later, Rcpp"
proxy NA
pryr "Rcpp"
ps NA
purrr "cli"
quantreg NA
QuickJSR NA
R.cache NA
R.methodsS3 NA
R.oo NA
R.utils NA
R6 NA
ragg "systemfonts, textshaping"
rappdirs NA
rapportools NA
rbibutils NA
rcmdcheck NA
RColorBrewer NA
Rcpp NA
RcppArmadillo "Rcpp"
RcppEigen "Rcpp"
RcppParallel NA
Rdpack NA
reactable NA
reactR NA
readr "cpp11, tzdb (>= 0.1.1)"
readxl "cpp11 (>= 0.4.0), progress"
reformulas NA
rematch NA
rematch2 NA
remotes NA
renv NA
report NA
repr NA
reprex NA
reshape2 "Rcpp"
rex NA
rio NA
rJava NA
rlang NA
rmarkdown NA
rmsfact NA
roxygen2 "cpp11"
rpart NA
rprojroot NA
rsconnect NA
Rsolnp NA
rstan "Rcpp (>= 1.0.7), RcppEigen (>= 0.3.4.0.0), BH (>= 1.75.0-0),\nStanHeaders (>= 2.32.0), RcppParallel (>= 5.1.4)"
rstanarm "StanHeaders (>= 2.32.0), rstan (>= 2.32.0), BH (>=\n1.72.0-2), Rcpp (>= 0.12.0), RcppEigen (>= 0.3.3.3.0),\nRcppParallel (>= 5.0.1)"
rstantools NA
rstatix NA
rstudioapi NA
rversions NA
rvest NA
s2 "Rcpp, wk"
sandwich NA
sass NA
scales NA
see NA
selectr NA
sessioninfo NA
sf "Rcpp"
shape NA
shiny NA
shinycssloaders NA
shinyjs NA
shinystan NA
shinythemes NA
sjlabelled NA
sjmisc NA
sjPlot NA
sjstats NA
skimr NA
snakecase NA
softbib NA
sourcetools NA
SparseM NA
spatial NA
StanHeaders "RcppEigen (>= 0.3.4.0.0), RcppParallel (>= 5.1.4)"
statmod NA
stringi NA
stringr NA
styler NA
summarytools NA
survey "Rcpp, RcppArmadillo"
survival NA
svglite "cpp11, systemfonts"
sys NA
systemfonts "cpp11 (>= 0.2.1)"
tables NA
tabulapdf NA
tensorA NA
testthat NA
textshaping "cpp11 (>= 0.2.1), systemfonts (>= 1.0.0)"
threejs NA
tibble NA
tidygraph "cpp11"
tidyr "cpp11 (>= 0.4.0)"
tidyselect NA
tidyverse NA
timechange "cpp11 (>= 0.2.7)"
tinyplot NA
tinytable NA
tinytex NA
transformr "cpp11"
triebeard "Rcpp"
truncnorm NA
tweenr "cpp11 (>= 0.4.2)"
tzdb "cpp11 (>= 0.4.2)"
units "Rcpp (>= 0.12.10)"
urlchecker NA
urltools "Rcpp"
usethis NA
utf8 NA
uuid NA
V8 "Rcpp"
vctrs NA
viridis NA
viridisLite NA
vroom "cpp11 (>= 0.2.0), progress (>= 1.2.1), tzdb (>= 0.1.1)"
waldo NA
whisker NA
withr NA
wk NA
writexl NA
xfun NA
xml2 NA
xmlparsedata NA
xopen NA
xtable NA
xts "zoo"
yaml NA
zip NA
zoo NA
base NA
boot NA
class NA
cluster NA
codetools NA
compiler NA
datasets NA
foreign NA
graphics NA
grDevices NA
grid NA
KernSmooth NA
lattice NA
MASS NA
Matrix NA
methods NA
mgcv NA
nlme NA
nnet NA
parallel NA
rpart NA
spatial NA
splines NA
stats NA
stats4 NA
survival NA
tcltk NA
tools NA
translations NA
utils NA
Suggests
abind NA
archive "covr, testthat"
askpass "testthat"
av "curl, testthat, ps, ggplot2, gapminder"
backports NA
base64enc NA
bayesplot "ggfortify, gridExtra (>= 2.2.1), hexbin, knitr (>= 1.16), loo\n(>= 2.0.0), RColorBrewer, rmarkdown (>= 1.0.0), rstan (>=\n2.17.1), rstanarm (>= 2.17.4), rstantools (>= 1.5.0), scales,\nshinystan (>= 2.3.0), survival, testthat (>= 2.0.0), vdiffr (>=\n1.0.2)"
bayestestR "BayesFactor (>= 0.9.12-4.4), bayesQR, bayesplot, betareg, BH,\nblavaan, bridgesampling, brms, collapse, curl, effectsize,\nemmeans, gamm4, ggdist, ggplot2, glmmTMB, httr2, KernSmooth,\nknitr, lavaan, lme4, logspline (>= 2.1.21), marginaleffects (>=\n0.24.0), MASS, mclust, mediation, modelbased, ordbetareg,\nparameters, patchwork, performance, quadprog, posterior,\nRcppEigen, rmarkdown, rstan, rstanarm, see (>= 0.8.5),\ntestthat, tweedie, withr"
bdsmatrix NA
betareg "car, distributions3 (>= 0.2.1), knitr, lattice, numDeriv,\npartykit, quarto, statmod, strucchange"
BH NA
bibtex "testthat (>= 3.0.0)"
bigD "covr, testthat (>= 3.0.0), tibble (>= 3.2.1)"
BiocManager "BiocVersion, BiocStyle, remotes, rmarkdown, testthat, withr,\ncurl, knitr"
BiocVersion NA
bit "testthat (>= 0.11.0), roxygen2, knitr, markdown, rmarkdown,\nmicrobenchmark, bit64 (>= 4.0.0), ff (>= 4.0.0)"
bit64 "testthat (>= 3.0.3), withr"
bitops NA
blob "covr, crayon, pillar (>= 1.2.1), testthat"
brew "testthat (>= 3.0.0)"
brio "covr, testthat (>= 3.0.0)"
broom "AER, AUC, bbmle, betareg (>= 3.2-1), biglm, binGroup, boot,\nbtergm (>= 1.10.6), car (>= 3.1-2), carData, caret, cluster,\ncmprsk, coda, covr, drc, e1071, emmeans, epiR, ergm (>=\n3.10.4), fixest (>= 0.9.0), gam (>= 1.15), gee, geepack,\nggplot2, glmnet, glmnetUtils, gmm, Hmisc, irlba, interp,\njoineRML, Kendall, knitr, ks, Lahman, lavaan (>= 0.6.18),\nleaps, lfe, lm.beta, lme4, lmodel2, lmtest (>= 0.9.38),\nlsmeans, maps, margins, MASS, mclust, mediation, metafor, mfx,\nmgcv, mlogit, modeldata, modeltests (>= 0.1.6), muhaz,\nmultcomp, network, nnet, orcutt (>= 2.2), ordinal, plm, poLCA,\npsych, quantreg, rmarkdown, robust, robustbase, rsample,\nsandwich, spdep (>= 1.1), spatialreg, speedglm, spelling,\nsurvey, survival (>= 3.6-4), systemfit, testthat (>= 2.1.0),\ntseries, vars, zoo"
broom.mixed "brms, dotwhisker, knitr, testthat, gamlss, gamlss.data,\nggplot2, GLMMadaptive, glmmADMB, glmmTMB, lmerTest, lme4,\nMatrix, MCMCglmm, mediation, mgcv, ordinal, pander, pbkrtest,\nposterior, rstan, rstanarm, rstantools, R2jags, TMB, rmarkdown"
bslib "bsicons, curl, fontawesome, future, ggplot2, knitr, magrittr,\nrappdirs, rmarkdown (>= 2.7), shiny (> 1.8.1), testthat,\nthematic, tools, utils, withr, yaml"
cachem "testthat"
calibrate NA
callr "asciicast (>= 2.3.1), cli (>= 1.1.0), mockery, ps, rprojroot,\nspelling, testthat (>= 3.2.0), withr (>= 2.3.0)"
car "alr4, boot, coxme, effects, knitr, leaps, lmtest, Matrix,\nMatrixModels, ordinal, plotrix, mvtnorm, rgl (>= 0.111.3), rio,\nsandwich, SparseM, survival, survey"
carData "car (>= 3.0-0)"
cards "testthat (>= 3.2.0), withr (>= 3.0.0)"
cellranger "covr, testthat (>= 1.0.0), knitr, rmarkdown"
checkmate "R6, fastmatch, data.table (>= 1.9.8), devtools, ggplot2,\nknitr, magrittr, microbenchmark, rmarkdown, testthat (>=\n3.0.4), tinytest (>= 1.1.0), tibble"
circlize "knitr, dendextend (>= 1.0.1), ComplexHeatmap (>= 2.0.0),\ngridBase, png, markdown, bezier, covr, rmarkdown"
class NA
classInt "spData (>= 0.2.6.2), units, knitr, rmarkdown, tinytest"
cli "callr, covr, crayon, digest, glue (>= 1.6.0), grDevices,\nhtmltools, htmlwidgets, knitr, methods, mockery, processx, ps\n(>= 1.3.4.9000), rlang (>= 1.0.2.9003), rmarkdown, rprojroot,\nrstudioapi, testthat, tibble, whoami, withr"
clipr "covr, knitr, rmarkdown, rstudioapi (>= 0.5), testthat (>=\n2.0.0)"
cluster "MASS, Matrix"
cmm NA
coda NA
collapse "fastverse, data.table, magrittr, kit, xts, zoo, plm, fixest,\nvars, RcppArmadillo, RcppEigen, tibble, dplyr, ggplot2, scales,\nmicrobenchmark, testthat, covr, knitr, rmarkdown, withr, bit64"
collections "testthat (>= 2.3.1)"
colorspace "datasets, utils, KernSmooth, MASS, kernlab, mvtnorm, vcd,\ntcltk, shiny, shinyjs, ggplot2, dplyr, scales, grid, png, jpeg,\nknitr, rmarkdown, RColorBrewer, rcartocolor, scico, viridis,\nwesanderson"
colourpicker "knitr (>= 1.7), rmarkdown, rstudioapi (>= 0.5),\nshinydisconnect"
commonmark "curl, testthat, xml2"
conflicted "callr, covr, dplyr, Matrix, methods, pkgload, testthat (>=\n3.0.0), withr"
correlation "BayesFactor, energy, ggplot2, ggraph, gt, Hmisc, knitr, lme4,\nMASS, mbend, polycor, poorman, ppcor, psych, rmarkdown, rmcorr,\nrstanarm, see (>= 0.8.1), testthat (>= 3.2.1), tidygraph, wdm,\nWRS2, openxlsx2 (>= 1.0)"
corrplot "seriation, knitr, RColorBrewer, rmarkdown, magrittr,\nprettydoc, testthat"
countrycode "altdoc, eurostat, testthat, tibble, ISOcodes, utf8"
cowplot "Cairo, covr, dplyr, forcats, gridGraphics (>= 0.4-0), knitr,\nlattice, magick, maps, PASWR, patchwork, rmarkdown, ragg,\ntestthat (>= 1.0.0), tidyr, vdiffr (>= 0.3.0), VennDiagram"
cowsay "fortunes, rmsfact, jsonlite, knitr, rmarkdown, testthat"
cpp11 "bench, brio, callr, cli, covr, decor, desc, ggplot2, glue,\nknitr, lobstr, mockery, progress, rmarkdown, scales, Rcpp,\ntestthat (>= 3.2.0), tibble, utils, vctrs, withr"
crayon "mockery, rstudioapi, testthat, withr"
credentials "testthat, knitr, rmarkdown"
crosstalk "shiny, ggplot2, testthat (>= 2.1.0), sass, bslib"
crul "testthat, roxygen2 (>= 7.1.1), fauxpas (>= 0.1.0), webmockr\n(>= 0.1.0), knitr, rmarkdown"
curl "spelling, testthat (>= 1.0.0), knitr, jsonlite, later,\nrmarkdown, httpuv (>= 1.4.4), webutils"
cyclocomp "testthat"
dagitty "igraph, knitr, base64enc (>= 0.1-3), testthat, markdown,\nrmarkdown, lavaan, CCP, fastDummies"
data.table "bit64 (>= 4.0.0), bit (>= 4.0.4), R.utils, xts, zoo (>=\n1.8-1), yaml, knitr, markdown"
dataverse "covr, haven, knitr, purrr, rmarkdown, testthat, devtools,\ntibble, yaml"
datawizard "bayestestR, boot, brms, curl, data.table, dplyr (>= 1.1),\neffectsize, emmeans, gamm4, ggplot2 (>= 3.5.0), gt, haven,\nhttr, knitr, lme4, mediation, modelbased, parameters (>=\n0.21.7), poorman (>= 0.2.7), psych, readxl, readr, rio,\nrmarkdown, rstanarm, see, testthat (>= 3.2.1), tibble, tidyr,\nwithr"
DBI "arrow, blob, covr, DBItest, dbplyr, downlit, dplyr, glue,\nhms, knitr, magrittr, nanoarrow (>= 0.3.0.1), RMariaDB,\nrmarkdown, rprojroot, RSQLite (>= 1.1-2), testthat (>= 3.0.0),\nvctrs, xml2"
dbplyr "bit64, covr, knitr, Lahman, nycflights13, odbc (>= 1.4.2),\nRMariaDB (>= 1.2.2), rmarkdown, RPostgres (>= 1.4.5),\nRPostgreSQL, RSQLite (>= 2.3.1), testthat (>= 3.1.10)"
Deriv "testthat (>= 0.11.0)"
desc "callr, covr, gh, spelling, testthat, whoami, withr"
devtools "BiocManager (>= 1.30.18), callr (>= 3.7.1), covr (>= 3.5.1),\ncurl (>= 4.3.2), digest (>= 0.6.29), DT (>= 0.23), foghorn (>=\n1.4.2), gh (>= 1.3.0), gmailr (>= 1.0.1), httr (>= 1.4.3),\nknitr (>= 1.39), lintr (>= 3.0.0), MASS, mockery (>= 0.4.3),\npingr (>= 2.0.1), rhub (>= 1.1.1), rmarkdown (>= 2.14),\nrstudioapi (>= 0.13), spelling (>= 2.2)"
diffobj "knitr, rmarkdown"
digest "tinytest, simplermarkdown"
distributional "testthat (>= 2.1.0), covr, mvtnorm, actuar (>= 2.0.0), evd,\nggdist, ggplot2, gk"
doBy "geepack, knitr, lme4, markdown, multcomp, pbkrtest (>=\n0.5.2), survival, testthat (>= 2.1.0)"
downlit "covr, htmltools, jsonlite, MASS, MassSpecWavelet, pkgload,\nrmarkdown, testthat (>= 3.0.0), xml2"
dplyr "bench, broom, callr, covr, DBI, dbplyr (>= 2.2.1), ggplot2,\nknitr, Lahman, lobstr, microbenchmark, nycflights13, purrr,\nrmarkdown, RMySQL, RPostgreSQL, RSQLite, stringi (>= 1.7.6),\ntestthat (>= 3.1.5), tidyr (>= 1.3.0), withr"
DT "knitr (>= 1.8), rmarkdown, shiny (>= 1.6), bslib, future,\ntestit, tibble"
dtplyr "bench, covr, knitr, rmarkdown, testthat (>= 3.1.2), tidyr (>=\n1.1.0), waldo (>= 0.3.1)"
duckdb "adbcdrivermanager, arrow (>= 13.0.0), bit64, callr, clock,\nDBItest, dbplyr, dplyr, rlang, testthat, tibble, vctrs, withr"
dygraphs "testthat"
e1071 "cluster, mlbench, nnet, randomForest, rpart, SparseM, xtable,\nMatrix, MASS, slam"
easystats "collapse, DHARMa, DT, flexdashboard (>= 0.6.2), Formula,\nggplot2, glmmTMB, httr, jsonlite, knitr, marginaleffects (>=\n0.25.0), mockery, pak, patchwork, rmarkdown, testthat (>=\n3.2.1), withr, xml2"
effectsize "correlation (>= 0.8.4), see (>= 0.8.0), afex, BayesFactor,\nboot, brms, car, emmeans, gt, knitr, lavaan, lme4, lmerTest,\nmgcv, parsnip, pwr, rmarkdown, rms, rstanarm, rstantools,\ntestthat (>= 3.1.0)"
ellipsis "covr, testthat"
emmeans "bayesplot, bayestestR, biglm, brms, car, coda (>= 0.17),\ncompositions, ggplot2, lattice, logspline, mediation, mgcv,\nmultcomp, multcompView, nlme, ordinal (>= 2014.11-12), pbkrtest\n(>= 0.4-1), lme4, lmerTest (>= 2.0.32), MASS, MuMIn, rsm,\nknitr, rmarkdown, sandwich, scales, splines, testthat, tibble,\nxtable (>= 1.8-2)"
emptyRpackage NA
estimability "knitr, rmarkdown"
evaluate "callr, covr, ggplot2 (>= 3.3.6), lattice, methods, pkgload,\nrlang, knitr, testthat (>= 3.0.0), withr"
fansi "unitizer, knitr, rmarkdown"
farver "covr, testthat (>= 3.0.0)"
fastmap "testthat (>= 2.1.1)"
flexmix "actuar, codetools, diptest, Ecdat, ellipse, gclus, glmnet,\nlme4 (>= 1.1), MASS, mgcv (>= 1.8-0), mlbench, multcomp,\nmvtnorm, SuppDists, survival"
flextable "bookdown (>= 0.40), broom, broom.mixed, chromote, cluster,\ncommonmark, doconv (>= 0.3.0), equatags, ggplot2, lme4, magick,\nmgcv, nlme, officedown, pdftools, pkgdown (>= 2.0.0), scales,\nsvglite, tables (>= 0.9.17), testthat (>= 3.0.0), webshot2,\nwithr, xtable"
fontawesome "covr, dplyr (>= 1.0.8), gt (>= 0.9.0), knitr (>= 1.31),\ntestthat (>= 3.0.0), rsvg"
fontBitstreamVera NA
fontLiberation NA
fontquiver "testthat, htmltools"
forcats "covr, dplyr, ggplot2, knitr, readr, rmarkdown, testthat (>=\n3.0.0), withr"
foreign NA
Formula NA
fortunes NA
fs "covr, crayon, knitr, pillar (>= 1.0.0), rmarkdown, spelling,\ntestthat (>= 3.0.0), tibble (>= 1.1.0), vctrs (>= 0.3.0), withr"
furrr "carrier, covr, dplyr (>= 0.7.4), knitr, listenv (>= 0.6.0),\nmagrittr, rmarkdown, testthat (>= 3.0.0), tidyselect, withr"
future "methods, RhpcBLASctl, R.rsp, markdown"
gargle "aws.ec2metadata, aws.signature, covr, httpuv, knitr,\nrmarkdown, sodium, spelling, testthat (>= 3.1.7)"
gdtools "curl, gfonts, methods, testthat"
generics "covr, pkgload, testthat (>= 3.0.0), tibble, withr"
gert "spelling, knitr, rmarkdown, testthat"
gfonts "knitr, rmarkdown, testthat (>= 2.1.0), vcr, covr"
gganimate "av, base64enc, covr, gifski (>= 1.4.3), htmltools, knitr,\nmagick, ragg, rmarkdown, sf, svglite, testthat"
ggdag "covr, knitr, rmarkdown, spelling, testthat (>= 3.0.0), vdiffr\n(>= 1.0.2), withr"
ggeffects "AER, afex, aod, bayestestR, betareg, brglm, brglm2, brms,\nbroom, car, carData, clubSandwich, dfidx, effects (>= 4.2-2),\neffectsize (>= 1.0.0), emmeans (>= 1.8.9), fixest, gam, gamlss,\ngamm4, gee, geepack, ggplot2, ggrepel, GLMMadaptive, glmmTMB\n(>= 1.1.7), gridExtra, gt, haven, htmltools, httr2, jsonlite,\nknitr, lme4 (>= 1.1-35), logistf, logitr, marginaleffects (>=\n0.25.0), modelbased (>= 0.9.0), MASS, Matrix, mice, MCMCglmm,\nMuMIn, mgcv, mclogit, mlogit, nestedLogit (>= 0.3.0), nlme,\nnnet, ordinal, parameters, parsnip, patchwork, pscl, plm,\nquantreg, rmarkdown, rms, robustbase, rstanarm, rstantools,\nsandwich, sdmTMB (>= 0.4.0), see, sjlabelled (>= 1.1.2),\nsjstats, speedglm, survey, survival, testthat, tibble,\ntinytable (>= 0.1.0), vdiffr, withr, VGAM"
ggExtra "knitr (>= 1.7), rmarkdown, rstudioapi (>= 0.5), testthat,\nvdiffr, fontquiver, svglite, withr, devtools"
ggforce "sessioninfo, concaveman, deldir, latex2exp, reshape2, units\n(>= 0.4-6), covr"
ggformula "tidyr, mosaicData, dplyr, lattice, mosaic, palmerpenguins,\ntestthat, vdiffr, knitr, rmarkdown, lubridate, survival, broom,\nmaps, sf, purrr, ggthemes, covr, ggplot2movies, interp,\nquantreg"
ggplot2 "covr, dplyr, ggplot2movies, hexbin, Hmisc, knitr, mapproj,\nmaps, multcomp, munsell, nlme, profvis, quantreg, ragg (>=\n1.2.6), RColorBrewer, rmarkdown, rpart, sf (>= 0.7-3), svglite\n(>= 2.1.2), testthat (>= 3.1.2), vdiffr (>= 1.0.6), xml2"
ggpubr "grDevices, knitr, RColorBrewer, gtable, testthat"
ggraph "network, knitr, rmarkdown, purrr, tibble, seriation, deldir,\ngganimate, covr, sf, sfnetworks"
ggrepel "knitr, rmarkdown, testthat, svglite, vdiffr, gridExtra, ggpp,\npatchwork, devtools, prettydoc, ggbeeswarm, dplyr, magrittr,\nreadr, stringr"
ggridges "covr, dplyr, patchwork, ggplot2movies, forcats, knitr,\nrmarkdown, testthat, vdiffr"
ggsci "gridExtra, knitr, ragg, rmarkdown"
ggsignif "knitr, rmarkdown, testthat, vdiffr (>= 1.0.2)"
gh "covr, knitr, mockery, rmarkdown, rprojroot, spelling,\ntestthat (>= 3.0.0), withr"
gifski "ggplot2, gapminder"
gitcreds "codetools, covr, knitr, mockery, oskeyring, rmarkdown,\ntestthat (>= 3.0.0), withr"
GlobalOptions "testthat (>= 1.0.0), knitr, markdown, GetoptLong"
globals NA
glue "crayon, DBI (>= 1.2.0), dplyr, knitr, magrittr, rlang,\nrmarkdown, RSQLite, testthat (>= 3.2.0), vctrs (>= 0.3.0),\nwaldo (>= 0.5.3), withr"
googledrive "curl, dplyr (>= 1.0.0), knitr, mockr, rmarkdown, spelling,\ntestthat (>= 3.1.3)"
googlesheets4 "readr, rmarkdown, spelling, testthat (>= 3.1.7)"
graphlayouts "testthat, ggplot2, uwot, oaqc"
gridExtra "ggplot2, egg, lattice, knitr, testthat"
groundhog "git2r, remotes"
gt "digest (>= 0.6.31), fontawesome (>= 0.5.2), ggplot2, grid,\ngtable, katex (>= 1.4.1), knitr, lubridate, magick, paletteer,\nRColorBrewer, rmarkdown (>= 2.20), rsvg, rvest, shiny (>=\n1.9.1), testthat (>= 3.1.9), tidyr, webshot2 (>= 0.1.0), withr"
gtable "covr, ggplot2, knitr, profvis, rmarkdown, testthat (>= 3.0.0)"
gtools "car, gplots, knitr, rstudioapi, SGP, taxize"
gtsummary "aod (>= 1.3.3), broom (>= 1.0.5), broom.helpers (>= 1.17.0),\nbroom.mixed (>= 0.2.9), car (>= 3.0-11), cardx (>= 0.2.3),\ncmprsk, effectsize (>= 0.6.0), emmeans (>= 1.7.3), flextable\n(>= 0.8.1), geepack (>= 1.3.10), ggstats (>= 0.2.1), huxtable\n(>= 5.4.0), insight (>= 0.15.0), kableExtra (>= 1.3.4), knitr\n(>= 1.37), lme4 (>= 1.1-31), mice (>= 3.10.0), nnet, officer,\nopenxlsx, parameters (>= 0.20.2), parsnip (>= 0.1.7),\nrmarkdown, smd (>= 0.6.6), spelling, survey (>= 4.2), survival\n(>= 3.6-4), testthat (>= 3.2.0), withr (>= 2.5.0), workflows\n(>= 0.2.4)"
GWalkR NA
haven "covr, crayon, fs, knitr, pillar (>= 1.4.0), rmarkdown,\ntestthat (>= 3.0.0), utf8"
here "conflicted, covr, fs, knitr, palmerpenguins, plyr, readr,\nrlang, rmarkdown, testthat, uuid, withr"
highr "knitr, markdown, testit"
hms "crayon, lubridate, pillar (>= 1.1.0), testthat (>= 3.0.0)"
htmlTable "testthat, XML, xml2, Hmisc, rmarkdown, chron, lubridate,\ntibble, purrr, tidyselect, glue, rlang, tidyr (>= 0.7.2), dplyr\n(>= 0.7.4)"
htmltools "Cairo, markdown, ragg, shiny, testthat, withr"
htmlwidgets "testthat"
httpcode "testthat"
httpuv "callr, curl, testthat, websocket"
httr "covr, httpuv, jpeg, knitr, png, readr, rmarkdown, testthat\n(>= 0.8.0), xml2"
httr2 "askpass, bench, clipr, covr, docopt, httpuv, jose, jsonlite,\nknitr, later (>= 1.4.0), paws.common, promises, rmarkdown,\ntestthat (>= 3.1.8), tibble, webfakes, xml2"
ids "knitr, rcorpora, rmarkdown, testthat"
igraph "ape (>= 5.7-0.1), callr, decor, digest, igraphdata, knitr,\nrgl (>= 1.3.14), rmarkdown, scales, stats4, tcltk, testthat,\nvdiffr, withr"
ini "testthat"
inline "Rcpp, tinytest"
insight "AER, afex, aod, ape, BayesFactor, bayestestR, bbmle,\nbdsmatrix, betareg, bife, biglm, BH, blavaan (>= 0.5-5), blme,\nboot, brms, broom, car, carData, censReg, cgam, clubSandwich,\ncobalt, coxme, cplm, crch, curl, datawizard, effectsize,\nemmeans, epiR, estimatr, feisr, fixest (>= 0.11.2), fungible,\nfwb, gam, gamlss, gamlss.data, gamm4, gbm, gee, geepack, geoR,\nggeffects (>= 2.2.0), GLMMadaptive, glmmTMB (>= 1.1.10),\nglmtoolbox, gmnl, grDevices, gt, httptest2, httr2, interp,\nivreg, JM, knitr, lavaan, lavaSearch2, lfe, lme4, lmerTest,\nlmtest, logistf, logitr, marginaleffects (>= 0.25.0), MASS,\nMatrix, mclogit, mclust, MCMCglmm, merTools, metaBMA, metadat,\nmetafor, metaplus, mgcv, mice (>= 3.17.0), mlogit, mmrm,\nmodelbased (>= 0.9.0), multgee, MuMIn, nestedLogit, nlme, nnet,\nnonnest2, ordinal, panelr, parameters, parsnip, pbkrtest,\nperformance, phylolm, plm, poorman, PROreg (>= 1.3.0), pscl,\npsych, quantreg, Rcpp, RcppEigen, rmarkdown, rms, robustbase,\nrobustlmm, rpart, rstanarm (>= 2.21.1), rstantools (>= 2.1.0),\nrstudioapi, sandwich, serp, speedglm, splines, statmod, survey,\nsurvival, svylme, testthat, tinytable (>= 0.1.0), TMB,\ntruncreg, tweedie, VGAM, WeightIt, withr"
installr "curl, XML, devtools, rjson, data.table, plyr, ggplot2, sp,\ntools, pkgbuild (>= 1.1.0), testthat (>= 2.1.0), mockery,\nR.utils"
isoband "covr, ggplot2, knitr, magick, microbenchmark, rmarkdown, sf,\ntestthat, xml2"
janitor "dbplyr, knitr, rmarkdown, RSQLite, sf, testthat (>= 3.0.0),\ntibble, tidygraph"
jquerylib "testthat"
jsonlite "httr, vctrs, testthat, knitr, rmarkdown, R.rsp, sf"
jtools "boot, huxtable, kableExtra, lme4, lmerTest, MASS, methods,\npbkrtest, RColorBrewer, scales, survey, weights, knitr,\nrmarkdown, testthat, vdiffr"
juicyjuice "testthat (>= 3.0.0)"
kableExtra "testthat, magick, tinytex, formattable, sparkline, webshot2"
KernSmooth "MASS, carData"
knitr "bslib, codetools, DBI (>= 0.4-1), digest, formatR, gifski,\ngridSVG, htmlwidgets (>= 0.7), jpeg, JuliaCall (>= 0.11.1),\nmagick, litedown, markdown (>= 1.3), png, ragg, reticulate (>=\n1.4), rgl (>= 0.95.1201), rlang, rmarkdown, sass, showtext,\nstyler (>= 1.2.0), targets (>= 0.6.0), testit, tibble,\ntikzDevice (>= 0.10), tinytex (>= 0.46), webshot, rstudioapi,\nsvglite"
labeling NA
labelled "testthat (>= 3.2.0), knitr, rmarkdown, questionr, snakecase,\nspelling"
languageserver "covr (>= 3.4.0), magrittr (>= 1.5), mockery (>= 0.4.2),\npacman, processx (>= 3.4.1), purrr (>= 0.3.3), testthat (>=\n2.1.0), withr (>= 2.3.0), rmarkdown (>= 2.0)"
later "knitr, nanonext, R6, rmarkdown, testthat (>= 2.1.0)"
latex2exp "testthat, waldo, knitr, ggplot2, rmarkdown, purrr, tibble,\nreactable, htmltools, RCurl, rlang, dplyr"
lattice "KernSmooth, MASS, latticeExtra, colorspace"
lazyeval "knitr, rmarkdown (>= 0.2.65), testthat, covr"
librarian "testthat, knitr, rmarkdown"
lifecycle "covr, crayon, knitr, lintr, rmarkdown, testthat (>= 3.0.1),\ntibble, tidyverse, tools, vctrs, withr"
lintr "bookdown, cyclocomp, jsonlite, patrick (>= 0.2.0), rlang,\nrmarkdown, rstudioapi (>= 0.2), testthat (>= 3.2.1), tibble,\ntufte, withr (>= 2.5.0)"
listenv "R.utils, R.rsp, markdown"
lme4 "knitr, rmarkdown, MEMSS, testthat (>= 0.8.1), ggplot2,\nmlmRev, optimx (>= 2013.8.6), gamm4, pbkrtest, HSAUR3,\nnumDeriv, car, dfoptim, mgcv, statmod, rr2, semEff, tibble,\nmerDeriv"
lmerTest "pbkrtest (>= 0.4-3), tools"
lmtest "car, strucchange, sandwich, dynlm, stats4, survival, AER"
lobstr "covr, pillar, pkgdown, testthat (>= 3.0.0)"
loo "bayesplot (>= 1.7.0), brms (>= 2.10.0), ggplot2, graphics,\nknitr, rmarkdown, rstan, rstanarm (>= 2.19.0), rstantools,\nspdep, testthat (>= 2.1.0)"
lpSolve NA
lubridate "covr, knitr, rmarkdown, testthat (>= 2.1.0), vctrs (>= 0.6.5)"
magick "av (>= 0.3), spelling, jsonlite, methods, knitr, rmarkdown,\nrsvg, webp, pdftools, ggplot2, gapminder, IRdisplay, tesseract\n(>= 2.0), gifski"
magrittr "covr, knitr, rlang, rmarkdown, testthat"
marginaleffects "AER, Amelia, afex, aod, bench, betareg, BH, bife, biglm,\nblme, boot, brglm2, brms, brmsmargins, broom, car, carData,\ncausaldata, clarify, cjoint, cobalt, collapse, conflicted,\ncountrycode, covr, crch, DALEXtra, DCchoice, dbarts,\ndistributional, dfidx, dplyr, emmeans, equivalence, estimatr,\nfixest, flexsurv, fmeffects, fontquiver, Formula, future,\nfuture.apply, fwb, gam, gamlss, gamlss.dist, geepack, ggdist,\nggokabeito, ggplot2, ggrepel, glmmTMB, glmtoolbox, glmx, haven,\nhere, itsadug, ivreg, kableExtra, lme4, lmerTest, logistf,\nmagrittr, MatchIt, MASS, mclogit, MCMCglmm, missRanger, mgcv,\nmice, miceadds, mlogit, mlr3verse, modelbased, modelsummary,\nmultcomp, nanoparquet, nlme, nnet, numDeriv, nycflights13,\noptmatch, ordbetareg, ordinal, parameters, parsnip, partykit,\npatchwork, pkgdown, phylolm, plm, polspline, posterior, pscl,\npurrr, quantreg, Rchoice, REndo, rcmdcheck, remotes,\nreticulate, rmarkdown, rms, robust, robustbase, robustlmm,\nrsample, rstanarm, rstantools, rstpm2, rstudioapi, rsvg,\nsampleSelection, sandwich, scam, spelling, speedglm, survey,\nsurvival, svglite, systemfit, systemfonts, tibble, tictoc,\ntidymodels, tidyr, tidyverse, tinysnapshot (>= 0.0.7),\ntinytable (>= 0.6.1), tinytest, titanic, truncreg, tsModel,\nwithr, workflows, yaml, xgboost, testthat (>= 3.0.0), altdoc,\nknitr, quarto"
markdown "knitr, rmarkdown (>= 2.18), yaml, RCurl"
MASS "lattice, nlme, nnet, survival"
Matrix "MASS, datasets, sfsmisc, tools"
MatrixModels NA
matrixStats "utils, base64enc, ggplot2, knitr, markdown, microbenchmark,\nR.devices, R.rsp"
maxLik "MASS, clue, dlm, plot3D, tibble, tinytest"
memoise "digest, aws.s3, covr, googleAuthR, googleCloudStorageR, httr,\ntestthat"
mgcv "parallel, survival, MASS"
microbenchmark "ggplot2, multcomp, RUnit"
migest "spelling, countrycode"
migration.indices NA
mime NA
miniUI NA
minqa NA
mipfp NA
miscTools "Ecdat (>= 0.1-5)"
mitools "RODBC, foreign"
modelbased "BH, brms, coda, collapse, correlation, curl, easystats,\neffectsize (>= 1.0.0), emmeans (>= 1.10.2), Formula, gamm4,\ngganimate, ggplot2, glmmTMB, httr2, knitr, lme4, lmerTest,\nlogspline, MASS, marginaleffects (>= 0.25.0), mgcv,\nnanoparquet, performance (>= 0.13.0), patchwork, pbkrtest,\npoorman, RcppEigen, report, rmarkdown, rstanarm, rtdists, see\n(>= 0.9.0), testthat (>= 3.2.1), vdiffr, withr"
modelr "compiler, covr, ggplot2, testthat (>= 3.0.0)"
modelsummary "AER, altdoc, Amelia, betareg, bookdown, brms, broom,\nbroom.mixed, car, clubSandwich, correlation, covr, did, digest,\nDT, estimatr, fixest, flextable, future, future.apply, gamlss,\nggdist, ggplot2, gh, gt (>= 0.8.0), gtExtras, haven, huxtable,\nlabelled, IRdisplay, ivreg, kableExtra, knitr, lavaan, lfe,\nlme4, lmtest, magick, magrittr, marginaleffects, MASS, mgcv,\nmice, nlme, nnet, officer, openxlsx, pandoc, parallel, pscl,\npsych, randomizr, remotes, rmarkdown, rstanarm, rsvg, sandwich,\nspelling, survey, survival, tibble, tictoc, tidyselect,\ntidyverse, tinysnapshot (>= 0.0.6), tinytest, tinytex,\nwebshot2, wesanderson"
modeltools NA
mosaic "ggstance, ggridges, vdiffr, lubridate, magrittr, NHANES,\nRCurl, sp, vcd, testthat (>= 3.0.0), knitr, tools, parallel,\nmapproj, rgl, rmarkdown, covr, formatR, palmerpenguins,\nggrepel, readr, ggdendro, gridExtra, splines, latticeExtra,\nglue, broom, leaflet"
mosaicCore "mosaicData, mosaic, ggformula, NHANES, testthat, mosaicCalc\n(>= 0.5.9)"
mosaicData "lattice, mosaic, reshape2, ggplot2, dplyr, tidyr, ggformula"
munsell "ggplot2, testthat"
mvtnorm "qrng, numDeriv"
nlme "MASS, SASmixed"
nloptr "knitr, rmarkdown, covr, tinytest"
nnet "MASS"
numDeriv NA
officer "devEMF, doconv (>= 0.3.0), ggplot2, knitr, magick, rmarkdown,\nrsvg, testthat"
openssl "curl, testthat (>= 2.1.0), digest, knitr, rmarkdown,\njsonlite, jose, sodium"
packrat "devtools, httr, knitr, mockery, rmarkdown, testthat (>=\n3.0.0)"
pacman "BiocManager, knitr, lattice, testthat (>= 0.9.0), XML"
pak "callr (>= 3.7.0), cli (>= 3.2.0), covr, curl (>= 4.3.2), desc\n(>= 1.4.1), filelock (>= 1.0.2), gitcreds, glue (>= 1.6.2),\njsonlite (>= 1.8.0), mockery, pingr, pkgbuild (>= 1.4.2),\npkgcache (>= 2.0.4), pkgdepends (>= 0.5.0.9001), pkgload,\npkgsearch (>= 3.1.0), processx (>= 3.8.1), ps (>= 1.6.0),\nrstudioapi, testthat (>= 3.2.0), withr"
pander "grid, lattice, ggplot2 (>= 0.9.2), sylly, sylly.en, logger,\nsurvival, microbenchmark, zoo, nlme, descr, MASS, knitr,\nrmarkdown, tables, reshape, memisc, Epi, randomForest, tseries,\ngtable, rms, forecast, data.table"
panelr "brms, broom.mixed, car, clubSandwich, geepack, generics,\nnlme, plm, sandwich, skimr, testthat, covr, knitr, rmarkdown"
parallelly "commonmark, base64enc"
parameters "AER, afex, aod, BayesFactor (>= 0.9.12-4.7), BayesFM, bbmle,\nbetareg, BH, biglm, blme, boot, brglm2, brms, broom,\nbroom.mixed, cAIC4, car, carData, cgam, ClassDiscovery,\nclubSandwich, cluster, cobalt, coda, coxme, cplm, dbscan, did,\ndistributional, domir (>= 0.2.0), drc, DRR, effectsize (>=\n0.8.6), EGAnet, emmeans (>= 1.7.0), epiR, estimatr, factoextra,\nFactoMineR, faraway, fastICA, fixest, fpc, gam, gamlss, gee,\ngeepack, ggeffects (>= 1.3.2), ggplot2, GLMMadaptive, glmmTMB\n(>= 1.1.10), glmtoolbox, GPArotation, gt, haven, httr2, Hmisc,\nivreg, knitr, lavaan, lfe, lm.beta, lme4, lmerTest, lmtest,\nlogistf, logitr, logspline, lqmm, M3C, marginaleffects (>=\n0.20.4), MASS, Matrix, mclogit, mclust, MCMCglmm, mediation,\nmerDeriv, metaBMA, metafor, mfx, mgcv, mice (>= 3.17.0), mmrm,\nmultcomp, MuMIn, NbClust, nFactors, nestedLogit, nlme, nnet,\nopenxlsx, ordinal, panelr, pbkrtest, PCDimension, performance\n(>= 0.12.0), plm, PMCMRplus, poorman, posterior, PROreg (>=\n1.3.0), pscl, psych, pvclust, quantreg, randomForest,\nRcppEigen, rmarkdown, rms, rstan, rstanarm, sandwich, see (>=\n0.8.1), serp, sparsepca, survey, survival, svylme, testthat (>=\n3.2.1), tidyselect, tinytable (>= 0.1.0), TMB, truncreg,\nvdiffr, VGAM, WeightIt (>= 1.2.0), withr, WRS2"
patchwork "knitr, rmarkdown, gridGraphics, gridExtra, ragg, testthat (>=\n2.1.0), vdiffr, covr, png, gt (>= 0.11.0)"
pbkrtest "markdown, knitr"
performance "AER, afex, BayesFactor, bayesplot, betareg, bigutilsr,\nblavaan, boot, brms, car, carData, CompQuadForm, correlation,\ncplm, dagitty, dbscan, DHARMa (>= 0.4.7), estimatr, fixest,\nflextable, forecast, ftExtra, gamm4, ggdag, glmmTMB (>=\n1.1.10), graphics, Hmisc, httr2, ICS, ICSOutlier, ISLR, ivreg,\nlavaan, lme4, lmtest, loo, MASS, Matrix, mclogit, mclust,\nmetadat, metafor, mgcv, mlogit, multimode, nestedLogit, nlme,\nnonnest2, ordinal, parallel, parameters (>= 0.22.0), patchwork,\npscl, psych, quantreg, qqplotr (>= 0.0.6), randomForest,\nRcppEigen, rempsyc, rmarkdown, rstanarm, rstantools, sandwich,\nsee (>= 0.9.0), survey, survival, testthat (>= 3.2.1), tweedie,\nVGAM, withr (>= 3.0.0)"
pglm "lmtest, car"
pillar "bit64, DBI, debugme, DiagrammeR, dplyr, formattable, ggplot2,\nknitr, lubridate, nanotime, nycflights13, palmerpenguins,\nrmarkdown, scales, stringi, survival, testthat (>= 3.1.1),\ntibble, units (>= 0.7.2), vdiffr, withr"
pkgbuild "covr, cpp11, knitr, Rcpp, rmarkdown, testthat (>= 3.2.0),\nwithr (>= 2.3.0)"
pkgconfig "covr, testthat, disposables (>= 1.0.3)"
pkgdown "covr, diffviewer, evaluate (>= 0.24.0), gert, gt, htmltools,\nhtmlwidgets, knitr, lifecycle, magick, methods, pkgload (>=\n1.0.2), quarto, rsconnect, rstudioapi, rticles, sass, testthat\n(>= 3.1.3), tools"
pkgload "bitops, jsonlite, mathjaxr, pak, Rcpp, remotes, rstudioapi,\ntestthat (>= 3.2.1.1), usethis"
PKI NA
plm "AER, car, statmod, urca, pder, texreg, knitr, rmarkdown,\nfixest, lfe"
plyr "abind, covr, doParallel, foreach, iterators, itertools,\ntcltk, testthat"
png NA
polyclip NA
polynom "knitr, rmarkdown"
poorman "knitr, rmarkdown, roxygen2, tinytest"
posterior "testthat (>= 2.1.0), caret (>= 6.0-84), gbm (>= 2.1.8),\nrandomForest (>= 4.6.14), e1071 (>= 1.7-3), dplyr, tidyr,\nknitr, ggplot2, ggdist, rmarkdown"
praise "testthat"
prettyunits "codetools, covr, testthat"
processx "callr (>= 3.7.3), cli (>= 3.3.0), codetools, covr, curl,\ndebugme, parallel, rlang (>= 1.0.2), testthat (>= 3.0.0),\nwebfakes, withr"
profvis "htmltools, knitr, rmarkdown, shiny, testthat (>= 3.0.0)"
progress "Rcpp, testthat (>= 3.0.0), withr"
promises "future (>= 1.21.0), knitr, purrr, rmarkdown, spelling,\ntestthat, vembedr"
proxy "cba"
pryr "testthat (>= 0.8.0)"
ps "callr, covr, curl, pillar, pingr, processx (>= 3.1.0), R6,\nrlang, testthat (>= 3.0.0), webfakes, withr"
purrr "covr, dplyr (>= 0.7.8), httr, knitr, lubridate, rmarkdown,\ntestthat (>= 3.0.0), tibble, tidyselect"
quantreg "interp, rgl, logspline, nor1mix, Formula, zoo, R.rsp, conquer"
QuickJSR "knitr, rmarkdown, tinytest"
R.cache NA
R.methodsS3 "codetools"
R.oo "tools"
R.utils "datasets, digest (>= 0.6.10)"
R6 "lobstr, testthat (>= 3.0.0)"
ragg "covr, graphics, grid, testthat (>= 3.0.0)"
rappdirs "roxygen2, testthat (>= 3.0.0), covr, withr"
rapportools NA
rbibutils "testthat"
rcmdcheck "covr, knitr, mockery, processx, ps, rmarkdown, svglite,\ntestthat, webfakes"
RColorBrewer NA
Rcpp "tinytest, inline, rbenchmark, pkgKitten (>= 0.1.2)"
RcppArmadillo "tinytest, Matrix (>= 1.3.0), pkgKitten, reticulate, slam"
RcppEigen "Matrix, inline, tinytest, pkgKitten, microbenchmark"
RcppParallel "Rcpp, RUnit, knitr, rmarkdown"
Rdpack "grDevices, testthat, rstudioapi, rprojroot, gbRd"
reactable "covr, crosstalk, dplyr, fontawesome, knitr, leaflet, MASS,\nrmarkdown, shiny, sparkline, testthat, tippy, V8"
reactR "htmlwidgets (>= 1.5.3), rmarkdown, shiny, V8, knitr, usethis,\njsonlite"
readr "covr, curl, datasets, knitr, rmarkdown, spelling, stringi,\ntestthat (>= 3.2.0), tzdb (>= 0.1.1), waldo, withr, xml2"
readxl "covr, knitr, rmarkdown, testthat (>= 3.1.6), withr"
reformulas "lme4, tinytest"
rematch "covr, testthat"
rematch2 "covr, testthat"
remotes "brew, callr, codetools, covr, curl, git2r (>= 0.23.0), knitr,\nmockery, pingr, pkgbuild (>= 1.0.1), rmarkdown, rprojroot,\ntestthat (>= 3.0.0), webfakes, withr"
renv "BiocManager, cli, compiler, covr, cpp11, devtools, gitcreds,\njsonlite, jsonvalidate, knitr, miniUI, modules, packrat, pak,\nR6, remotes, reticulate, rmarkdown, rstudioapi, shiny,\ntestthat, uuid, waldo, yaml, webfakes"
report "BayesFactor, brms, collapse, ivreg, knitr, lavaan, lme4,\ndplyr, Formula, rmarkdown, rstanarm, survival, modelbased (>=\n0.9.0), emmeans, marginaleffects (>= 0.25.0), RcppEigen, BH,\ntestthat (>= 3.2.1)"
repr "methods, highr, Cairo, stringr, testthat (>= 3.0.0), leaflet"
reprex "covr, fortunes, miniUI, rprojroot, sessioninfo, shiny,\nspelling, styler (>= 1.2.0), testthat (>= 3.2.1)"
reshape2 "covr, lattice, testthat (>= 0.8.0)"
rex "covr, dplyr, ggplot2, Hmisc, knitr, magrittr, rmarkdown,\nroxygen2, rvest, stringr, testthat"
rio "datasets, bit64, testthat, knitr, magrittr, clipr, fst,\nhexView, jsonlite, pzfx, readODS (>= 2.1.0), rmarkdown, rmatio,\nxml2 (>= 1.2.0), yaml, qs, arrow (>= 0.17.0), stringi, withr,\nnanoparquet"
rJava NA
rlang "cli (>= 3.1.0), covr, crayon, fs, glue, knitr, magrittr,\nmethods, pillar, rmarkdown, stats, testthat (>= 3.0.0), tibble,\nusethis, vctrs (>= 0.2.3), withr"
rmarkdown "digest, dygraphs, fs, rsconnect, downlit (>= 0.4.0), katex\n(>= 1.4.0), sass (>= 0.4.0), shiny (>= 1.6.0), testthat (>=\n3.0.3), tibble, vctrs, cleanrmd, withr (>= 2.4.2), xml2"
rmsfact NA
roxygen2 "covr, R.methodsS3, R.oo, rmarkdown (>= 2.16), testthat (>=\n3.1.2), yaml"
rpart "survival"
rprojroot "covr, knitr, lifecycle, mockr, rlang, rmarkdown, testthat (>=\n3.0.0), withr"
rsconnect "Biobase, BiocManager, foreign, knitr, MASS, plumber (>=\n0.3.2), quarto, RCurl, reticulate, rmarkdown (>= 1.1), shiny,\ntestthat (>= 3.1.9), webfakes, withr"
Rsolnp NA
rstan "testthat (>= 3.0.4), parallel, KernSmooth, shinystan,\nbayesplot, rmarkdown, rstantools, rstudioapi, Matrix, knitr,\ncoda, V8"
rstanarm "biglm, betareg, data.table (>= 1.10.0), digest, gridExtra,\nHSAUR3, knitr (>= 1.15.1), MASS, mgcv (>= 1.8-13), rmarkdown,\nroxygen2, StanHeaders (>= 2.21.0), testthat (>= 1.0.2), gamm4,\nshiny, V8"
rstantools "rstan (>= 2.17.2), usethis (>= 1.5.1), testthat (>= 2.0.0),\nknitr, pkgbuild, pkgload, roxygen2 (>= 6.0.1), rmarkdown,\nrstudioapi"
rstatix "knitr, rmarkdown, ggpubr, graphics, emmeans, coin, boot,\ntestthat, spelling"
rstudioapi "testthat, knitr, rmarkdown, clipr, covr"
rversions "covr, mockery, testthat"
rvest "chromote, covr, knitr, R6, readr, repurrrsive, rmarkdown,\nspelling, stringi (>= 0.3.1), testthat (>= 3.0.2), webfakes"
s2 "bit64, testthat (>= 3.0.0), vctrs"
sandwich "AER, car, geepack, lattice, lme4, lmtest, MASS, multiwayvcov,\nparallel, pcse, plm, pscl, scatterplot3d, stats4, strucchange,\nsurvival"
sass "testthat, knitr, rmarkdown, withr, shiny, curl"
scales "bit64, covr, dichromat, ggplot2, hms (>= 0.5.0), stringi,\ntestthat (>= 3.0.0)"
see "BH, brms, collapse, curl, DHARMa, emmeans, factoextra, ggdag,\nggdist, ggraph, ggrepel, ggridges, ggside, glmmTMB, grid, httr,\nhttr2, lavaan, lme4, logspline, marginaleffects, MASS, mclogit,\nmclust, merDeriv, mgcv, metafor, NbClust, nFactors, poorman,\npsych, qqplotr (>= 0.0.6), randomForest, RcppEigen, rlang,\nrmarkdown, rstanarm, scales (>= 1.3.0), splines, testthat (>=\n3.2.1), tidygraph, vdiffr (>= 1.0.8)"
selectr "testthat, XML, xml2"
sessioninfo "callr, covr, gh, reticulate, rmarkdown, testthat (>= 3.2.0),\nwithr"
sf "blob, nanoarrow, covr, dplyr (>= 1.0.0), ggplot2, knitr,\nlwgeom (>= 0.2-14), maps, mapview, Matrix, microbenchmark,\nodbc, pbapply, pillar, pool, raster, rlang, rmarkdown,\nRPostgres (>= 1.1.0), RPostgreSQL, RSQLite, sp (>= 1.2-4),\nspatstat (>= 2.0-1), spatstat.geom, spatstat.random,\nspatstat.linnet, spatstat.utils, stars (>= 0.2-0), terra,\ntestthat (>= 3.0.0), tibble (>= 1.4.1), tidyr (>= 1.2.0),\ntidyselect (>= 1.0.0), tmap (>= 2.0), vctrs, wk (>= 0.9.0)"
shape NA
shiny "coro (>= 1.1.0), datasets, DT, Cairo (>= 1.5-5), testthat (>=\n3.0.0), knitr (>= 1.6), markdown, rmarkdown, ggplot2, reactlog\n(>= 1.0.0), magrittr, yaml, future, dygraphs, ragg, showtext,\nsass"
shinycssloaders "knitr, shinydisconnect, shinyjs"
shinyjs "htmltools (>= 0.2.9), knitr (>= 1.7), rmarkdown, shinyAce,\nshinydisconnect, testthat (>= 0.9.1)"
shinystan "cmdstanr (>= 0.4.0), coda, knitr (>= 1.9), posterior (>=\n1.0.0), rmarkdown (>= 0.8.1), rsconnect (>= 0.4.2), rstanarm\n(>= 2.17.4), testthat"
shinythemes NA
sjlabelled "dplyr, haven (>= 1.1.2), magrittr, sjmisc, sjPlot, knitr,\nrlang, rmarkdown, snakecase, testthat"
sjmisc "ggplot2, graphics, haven (>= 2.0.0), mice, nnet, sjPlot,\nsjstats, knitr, rmarkdown, stringdist, testthat, tidyr"
sjPlot "brms, car, clubSandwich, cluster, cowplot, effects, haven,\nGPArotation, ggrepel, glmmTMB, gridExtra, ggridges, httr, lme4,\nnFactors, pscl, psych, rmarkdown, rstanarm, sandwich, splines,\nsurvey, TMB, testthat"
sjstats "brms, car, coin, ggplot2, lme4, MASS, pscl, pwr, survey,\ntestthat"
skimr "covr, crayon, data.table, dtplyr, extrafont, haven,\nlubridate, rmarkdown, testthat (>= 2.0.0), withr"
snakecase "testthat, covr, tibble, purrrlyr, knitr, rmarkdown, magrittr"
softbib NA
sourcetools "testthat"
SparseM "knitr"
spatial "MASS"
StanHeaders "Rcpp, BH (>= 1.75.0-0), knitr (>= 1.36), rmarkdown, Matrix,\nmethods, rstan, withr"
statmod "MASS, tweedie"
stringi NA
stringr "covr, dplyr, gt, htmltools, htmlwidgets, knitr, rmarkdown,\ntestthat (>= 3.0.0), tibble"
styler "data.tree (>= 0.1.6), digest, here, knitr, prettycode,\nrmarkdown, roxygen2, rstudioapi (>= 0.7), tibble (>= 1.4.2),\ntestthat (>= 3.0.0)"
summarytools "forcats, formatR, haven, kableExtra, knitr, magrittr,\nrmarkdown, rstudioapi, backports"
survey "foreign, MASS, KernSmooth, hexbin, RSQLite, quantreg,\nparallel, CompQuadForm, DBI, AER, SUMMER (>= 1.4.0), R.rsp"
survival NA
svglite "covr, fontquiver (>= 0.2.0), htmltools, knitr, rmarkdown,\ntestthat (>= 3.0.0), xml2 (>= 1.0.0)"
sys "unix (>= 1.4), spelling, testthat"
systemfonts "covr, farver, graphics, knitr, rmarkdown, testthat (>= 2.1.0)"
tables "magrittr, kableExtra (>= 0.9.0), Hmisc, bookdown, rmarkdown,\npkgdown, formatters, tinytable (>= 0.0.5)"
tabulapdf "graphics, grDevices, knitr, miniUI, shiny, testthat,\nrmarkdown, covr"
tensorA NA
testthat "covr, curl (>= 0.9.5), diffviewer (>= 0.1.0), knitr,\nrmarkdown, rstudioapi, S7, shiny, usethis, vctrs (>= 0.1.0),\nxml2"
textshaping "covr, grDevices, grid, knitr, rmarkdown, testthat (>= 3.0.0)"
threejs "maps"
tibble "bench, bit64, blob, brio, callr, cli, covr, crayon (>=\n1.3.4), DiagrammeR, dplyr, evaluate, formattable, ggplot2,\nhere, hms, htmltools, knitr, lubridate, mockr, nycflights13,\npkgbuild, pkgload, purrr, rmarkdown, stringi, testthat (>=\n3.0.2), tidyr, withr"
tidygraph "ape, covr, data.tree, graph, influenceR, methods, netrankr,\nNetSwan, network, seriation, testthat (>= 3.0.0)"
tidyr "covr, data.table, knitr, readr, repurrrsive (>= 1.1.0),\nrmarkdown, testthat (>= 3.0.0)"
tidyselect "covr, crayon, dplyr, knitr, magrittr, rmarkdown, stringr,\ntestthat (>= 3.1.1), tibble (>= 2.1.3)"
tidyverse "covr (>= 3.6.1), feather (>= 0.3.5), glue (>= 1.6.2), mockr\n(>= 0.2.0), knitr (>= 1.41), rmarkdown (>= 2.20), testthat (>=\n3.1.6)"
timechange "testthat (>= 0.7.1.99), knitr"
tinyplot "altdoc (>= 0.5.0), fontquiver, png, rsvg, svglite, tinytest,\ntinysnapshot (>= 0.0.3), knitr"
tinytable "base64enc, data.table (>= 1.15.2), estimatr, fansi, ggplot2,\ngh, magrittr, marginaleffects, markdown, modelsummary, pandoc,\nquarto, rmarkdown, rstudioapi, scales, stringi, tibble,\ntinysnapshot, tinytest, tinytex, webshot2"
tinytex "testit, rstudioapi"
transformr "covr, magrittr"
triebeard "knitr, rmarkdown, testthat"
truncnorm "testthat"
tweenr "testthat, covr"
tzdb "covr, testthat (>= 3.0.0)"
units "NISTunits, measurements, xml2, magrittr, pillar (>= 1.3.0),\ndplyr (>= 1.0.0), vctrs (>= 0.3.1), ggplot2 (> 3.2.1), testthat\n(>= 3.0.0), vdiffr, knitr, rmarkdown"
urlchecker "covr"
urltools "testthat, knitr"
usethis "covr, knitr, magick, pkgload (>= 1.3.2.1), rmarkdown,\nroxygen2 (>= 7.1.2), spelling (>= 1.2), styler (>= 1.2.0),\ntestthat (>= 3.1.8)"
utf8 "cli, covr, knitr, rlang, rmarkdown, testthat (>= 3.0.0),\nwithr"
uuid NA
V8 "testthat, knitr, rmarkdown"
vctrs "bit64, covr, crayon, dplyr (>= 0.8.5), generics, knitr,\npillar (>= 1.4.4), pkgdown (>= 2.0.1), rmarkdown, testthat (>=\n3.0.0), tibble (>= 3.1.3), waldo (>= 0.2.0), withr, xml2,\nzeallot"
viridis "hexbin (>= 1.27.0), scales, MASS, knitr, dichromat,\ncolorspace, httr, mapproj, vdiffr, svglite (>= 1.2.0),\ntestthat, covr, rmarkdown, maps, terra"
viridisLite "hexbin (>= 1.27.0), ggplot2 (>= 1.0.1), testthat, covr"
vroom "archive, bench (>= 1.1.0), covr, curl, dplyr, forcats, fs,\nggplot2, knitr, patchwork, prettyunits, purrr, rmarkdown,\nrstudioapi, scales, spelling, testthat (>= 2.1.0), tidyr,\nutils, waldo, xml2"
waldo "bit64, R6, S7, testthat (>= 3.0.0), withr, xml2"
whisker "markdown"
withr "callr, DBI, knitr, methods, rlang, rmarkdown (>= 2.12),\nRSQLite, testthat (>= 3.0.0)"
wk "testthat (>= 3.0.0), vctrs (>= 0.3.0), sf, tibble, readr"
writexl "spelling, readxl, nycflights13, testthat, bit64"
xfun "testit, parallel, codetools, methods, rstudioapi, tinytex (>=\n0.30), mime, litedown (>= 0.4), commonmark, knitr (>= 1.47),\nremotes, pak, rhub, renv, curl, xml2, jsonlite, magick, yaml,\nqs, rmarkdown"
xml2 "covr, curl, httr, knitr, magrittr, mockery, rmarkdown,\ntestthat (>= 3.2.0), xslt"
xmlparsedata "covr, testthat, xml2"
xopen "ps, testthat (>= 3.0.0)"
xtable "knitr, plm, zoo, survival"
xts "timeSeries, timeDate, tseries, chron, tinytest"
yaml "RUnit"
zip "covr, pillar, processx, R6, testthat, withr"
zoo "AER, coda, chron, ggplot2 (>= 3.0.0), mondate, scales,\nstinepack, strucchange, timeDate, timeSeries, tis, tseries, xts"
base "methods"
boot "MASS, survival"
class NA
cluster "MASS, Matrix"
codetools NA
compiler NA
datasets NA
foreign NA
graphics NA
grDevices "KernSmooth"
grid NA
KernSmooth "MASS, carData"
lattice "KernSmooth, MASS, latticeExtra, colorspace"
MASS "lattice, nlme, nnet, survival"
Matrix "MASS, datasets, sfsmisc, tools"
methods "codetools"
mgcv "parallel, survival, MASS"
nlme "MASS, SASmixed"
nnet "MASS"
parallel "methods"
rpart "survival"
spatial "MASS"
splines "Matrix, methods"
stats "MASS, Matrix, SuppDists, methods, stats4"
stats4 NA
survival NA
tcltk NA
tools "codetools, methods, xml2, curl, commonmark, knitr, xfun, mathjaxr, V8"
translations NA
utils "methods, xml2, commonmark, knitr, jsonlite"
Enhances
abind NA
archive NA
askpass NA
av NA
backports NA
base64enc "png"
bayesplot NA
bayestestR NA
bdsmatrix NA
betareg NA
BH NA
bibtex NA
bigD NA
BiocManager NA
BiocVersion NA
bit NA
bit64 NA
bitops NA
blob NA
brew NA
brio NA
broom NA
broom.mixed NA
bslib NA
cachem NA
calibrate NA
callr NA
car NA
carData NA
cards NA
cellranger NA
checkmate NA
circlize NA
class NA
classInt NA
cli NA
clipr NA
cluster "mvoutlier, fpc, ellipse, sfsmisc"
cmm NA
coda NA
collapse NA
collections NA
colorspace NA
colourpicker NA
commonmark NA
conflicted NA
correlation NA
corrplot NA
countrycode NA
cowplot NA
cowsay NA
cpp11 NA
crayon NA
credentials NA
crosstalk NA
crul NA
curl NA
cyclocomp NA
dagitty NA
data.table NA
dataverse NA
datawizard NA
DBI NA
dbplyr NA
Deriv NA
desc NA
devtools NA
diffobj NA
digest NA
distributional NA
doBy NA
downlit NA
dplyr NA
DT NA
dtplyr NA
duckdb NA
dygraphs "rmarkdown (>= 0.3.3), shiny (>= 0.10.2.1)"
e1071 NA
easystats NA
effectsize NA
ellipsis NA
emmeans "CARBayes, coxme, gee, geepack, MCMCglmm, MCMCpack, mice,\nnnet, pscl, rstanarm, sommer, survival"
emptyRpackage NA
estimability NA
evaluate NA
fansi NA
farver NA
fastmap NA
flexmix NA
flextable NA
fontawesome NA
fontBitstreamVera NA
fontLiberation NA
fontquiver NA
forcats NA
foreign NA
Formula NA
fortunes NA
fs NA
furrr NA
future NA
gargle NA
gdtools NA
generics NA
gert NA
gfonts NA
gganimate NA
ggdag NA
ggeffects NA
ggExtra NA
ggforce NA
ggformula NA
ggplot2 "sp"
ggpubr NA
ggraph NA
ggrepel NA
ggridges NA
ggsci NA
ggsignif NA
gh NA
gifski NA
gitcreds NA
GlobalOptions NA
globals NA
glue NA
googledrive NA
googlesheets4 NA
graphlayouts NA
gridExtra NA
groundhog NA
gt NA
gtable NA
gtools NA
gtsummary NA
GWalkR NA
haven NA
here NA
highr NA
hms NA
htmlTable NA
htmltools "knitr"
htmlwidgets "shiny (>= 1.1)"
httpcode NA
httpuv NA
httr NA
httr2 NA
ids NA
igraph "graph"
ini NA
inline NA
insight NA
installr NA
isoband NA
janitor NA
jquerylib NA
jsonlite NA
jtools "brms, quantreg, rstanarm"
juicyjuice NA
kableExtra NA
KernSmooth NA
knitr NA
labeling NA
labelled "memisc"
languageserver NA
later NA
latex2exp NA
lattice "chron, zoo"
lazyeval NA
librarian NA
lifecycle NA
lintr "data.table"
listenv NA
lme4 NA
lmerTest NA
lmtest NA
lobstr NA
loo NA
lpSolve NA
lubridate "chron, data.table, timeDate, tis, zoo"
magick NA
magrittr NA
marginaleffects NA
markdown NA
MASS NA
Matrix "SparseM, graph"
MatrixModels NA
matrixStats NA
maxLik NA
memoise NA
mgcv NA
microbenchmark NA
migest NA
migration.indices NA
mime NA
miniUI NA
minqa NA
mipfp NA
miscTools NA
mitools NA
modelbased NA
modelr NA
modelsummary NA
modeltools NA
mosaic "manipulate"
mosaicCore NA
mosaicData NA
munsell NA
mvtnorm NA
nlme NA
nloptr NA
nnet NA
numDeriv NA
officer NA
openssl NA
packrat NA
pacman NA
pak NA
pander NA
panelr NA
parallelly NA
parameters NA
patchwork NA
pbkrtest NA
performance NA
pglm NA
pillar NA
pkgbuild NA
pkgconfig NA
pkgdown NA
pkgload NA
PKI "gmp"
plm NA
plyr NA
png NA
polyclip NA
polynom NA
poorman NA
posterior NA
praise NA
prettyunits NA
processx NA
profvis NA
progress NA
promises NA
proxy NA
pryr NA
ps NA
purrr NA
quantreg NA
QuickJSR NA
R.cache NA
R.methodsS3 NA
R.oo NA
R.utils NA
R6 NA
ragg NA
rappdirs NA
rapportools NA
rbibutils NA
rcmdcheck NA
RColorBrewer NA
Rcpp NA
RcppArmadillo NA
RcppEigen NA
RcppParallel NA
Rdpack NA
reactable NA
reactR NA
readr NA
readxl NA
reformulas NA
rematch NA
rematch2 NA
remotes NA
renv NA
report NA
repr "data.table, tibble, htmlwidgets, vegalite, plotly, geojsonio"
reprex NA
reshape2 NA
rex NA
rio NA
rJava NA
rlang "winch"
rmarkdown NA
rmsfact NA
roxygen2 NA
rpart NA
rprojroot NA
rsconnect NA
Rsolnp NA
rstan NA
rstanarm NA
rstantools NA
rstatix NA
rstudioapi NA
rversions NA
rvest NA
s2 NA
sandwich NA
sass NA
scales NA
see NA
selectr NA
sessioninfo NA
sf NA
shape NA
shiny NA
shinycssloaders NA
shinyjs NA
shinystan NA
shinythemes NA
sjlabelled NA
sjmisc NA
sjPlot NA
sjstats NA
skimr NA
snakecase NA
softbib NA
sourcetools NA
SparseM NA
spatial NA
StanHeaders NA
statmod NA
stringi NA
stringr NA
styler NA
summarytools NA
survey NA
survival NA
svglite NA
sys NA
systemfonts NA
tables NA
tabulapdf NA
tensorA NA
testthat NA
textshaping NA
threejs "knitr, shiny"
tibble NA
tidygraph NA
tidyr NA
tidyselect NA
tidyverse NA
timechange NA
tinyplot NA
tinytable "knitr"
tinytex NA
transformr NA
triebeard NA
truncnorm NA
tweenr NA
tzdb NA
units NA
urlchecker NA
urltools NA
usethis NA
utf8 NA
uuid NA
V8 NA
vctrs NA
viridis NA
viridisLite NA
vroom NA
waldo NA
whisker NA
withr NA
wk NA
writexl NA
xfun NA
xml2 NA
xmlparsedata NA
xopen NA
xtable NA
xts NA
yaml NA
zip NA
zoo NA
base "chron, date, round"
boot NA
class NA
cluster "mvoutlier, fpc, ellipse, sfsmisc"
codetools NA
compiler NA
datasets NA
foreign NA
graphics "vcd"
grDevices NA
grid NA
KernSmooth NA
lattice "chron, zoo"
MASS NA
Matrix "SparseM, graph"
methods NA
mgcv NA
nlme NA
nnet NA
parallel "snow, Rmpi"
rpart NA
spatial NA
splines NA
stats "Kendall, coin, multcomp, pcaPP, pspearman, robustbase"
stats4 NA
survival NA
tcltk NA
tools NA
translations NA
utils NA
License License_is_FOSS
abind "MIT + file LICENSE" NA
archive "MIT + file LICENSE" NA
askpass "MIT + file LICENSE" NA
av "MIT + file LICENSE" NA
backports "GPL-2 | GPL-3" NA
base64enc "GPL-2 | GPL-3" NA
bayesplot "GPL (>= 3)" NA
bayestestR "GPL-3" NA
bdsmatrix "LGPL-2" NA
betareg "GPL-2 | GPL-3" NA
BH "BSL-1.0" NA
bibtex "GPL (>= 2)" NA
bigD "MIT + file LICENSE" NA
BiocManager "Artistic-2.0" NA
BiocVersion "Artistic-2.0" NA
bit "GPL-2 | GPL-3" NA
bit64 "GPL-2 | GPL-3" NA
bitops "GPL (>= 2)" NA
blob "MIT + file LICENSE" NA
brew "GPL (>= 2)" NA
brio "MIT + file LICENSE" NA
broom "MIT + file LICENSE" NA
broom.mixed "GPL-3" NA
bslib "MIT + file LICENSE" NA
cachem "MIT + file LICENSE" NA
calibrate "GPL-2" NA
callr "MIT + file LICENSE" NA
car "GPL (>= 2)" NA
carData "GPL (>= 2)" NA
cards "Apache License 2.0" NA
cellranger "MIT + file LICENSE" NA
checkmate "BSD_3_clause + file LICENSE" NA
circlize "MIT + file LICENSE" NA
class "GPL-2 | GPL-3" NA
classInt "GPL (>= 2)" NA
cli "MIT + file LICENSE" NA
clipr "GPL-3" NA
cluster "GPL (>= 2)" NA
cmm "GPL (>= 2)" NA
coda "GPL (>= 2)" NA
collapse "GPL (>= 2) | file LICENSE" NA
collections "MIT + file LICENSE" NA
colorspace "BSD_3_clause + file LICENSE" NA
colourpicker "MIT + file LICENSE" NA
commonmark "BSD_2_clause + file LICENSE" NA
conflicted "MIT + file LICENSE" NA
correlation "MIT + file LICENSE" NA
corrplot "MIT + file LICENSE" NA
countrycode "GPL-3" NA
cowplot "GPL-2" NA
cowsay "MIT + file LICENSE" NA
cpp11 "MIT + file LICENSE" NA
crayon "MIT + file LICENSE" NA
credentials "MIT + file LICENSE" NA
crosstalk "MIT + file LICENSE" NA
crul "MIT + file LICENSE" NA
curl "MIT + file LICENSE" NA
cyclocomp "MIT + file LICENSE" NA
dagitty "GPL-2" NA
data.table "MPL-2.0 | file LICENSE" NA
dataverse "GPL-2" NA
datawizard "MIT + file LICENSE" NA
DBI "LGPL (>= 2.1)" NA
dbplyr "MIT + file LICENSE" NA
Deriv "GPL (>= 3)" NA
desc "MIT + file LICENSE" NA
devtools "MIT + file LICENSE" NA
diffobj "GPL-2 | GPL-3" NA
digest "GPL (>= 2)" NA
distributional "GPL-3" NA
doBy "GPL (>= 2)" NA
downlit "MIT + file LICENSE" NA
dplyr "MIT + file LICENSE" NA
DT "GPL-3 | file LICENSE" NA
dtplyr "MIT + file LICENSE" NA
duckdb "MIT + file LICENSE" NA
dygraphs "MIT + file LICENSE" NA
e1071 "GPL-2 | GPL-3" NA
easystats "MIT + file LICENSE" NA
effectsize "MIT + file LICENSE" NA
ellipsis "MIT + file LICENSE" NA
emmeans "GPL-2 | GPL-3" NA
emptyRpackage "None" NA
estimability "GPL (>= 3)" NA
evaluate "MIT + file LICENSE" NA
fansi "GPL-2 | GPL-3" NA
farver "MIT + file LICENSE" NA
fastmap "MIT + file LICENSE" NA
flexmix "GPL (>= 2)" NA
flextable "GPL-3" NA
fontawesome "MIT + file LICENSE" NA
fontBitstreamVera "file LICENCE" "yes"
fontLiberation "file LICENSE" "yes"
fontquiver "GPL-3 | file LICENSE" NA
forcats "MIT + file LICENSE" NA
foreign "GPL (>= 2)" NA
Formula "GPL-2 | GPL-3" NA
fortunes "GPL-2 | GPL-3" NA
fs "MIT + file LICENSE" NA
furrr "MIT + file LICENSE" NA
future "LGPL (>= 2.1)" NA
gargle "MIT + file LICENSE" NA
gdtools "GPL-3 | file LICENSE" NA
generics "MIT + file LICENSE" NA
gert "MIT + file LICENSE" NA
gfonts "GPL-3" NA
gganimate "MIT + file LICENSE" NA
ggdag "MIT + file LICENSE" NA
ggeffects "MIT + file LICENSE" NA
ggExtra "MIT + file LICENSE" NA
ggforce "MIT + file LICENSE" NA
ggformula "MIT + file LICENSE" NA
ggplot2 "MIT + file LICENSE" NA
ggpubr "GPL (>= 2)" NA
ggraph "MIT + file LICENSE" NA
ggrepel "GPL-3 | file LICENSE" NA
ggridges "GPL-2 | file LICENSE" NA
ggsci "GPL (>= 3)" NA
ggsignif "GPL-3 | file LICENSE" NA
gh "MIT + file LICENSE" NA
gifski "MIT + file LICENSE" NA
gitcreds "MIT + file LICENSE" NA
GlobalOptions "MIT + file LICENSE" NA
globals "LGPL (>= 2.1)" NA
glue "MIT + file LICENSE" NA
googledrive "MIT + file LICENSE" NA
googlesheets4 "MIT + file LICENSE" NA
graphlayouts "MIT + file LICENSE" NA
gridExtra "GPL (>= 2)" NA
groundhog "GPL-3" NA
gt "MIT + file LICENSE" NA
gtable "MIT + file LICENSE" NA
gtools "GPL-2" NA
gtsummary "MIT + file LICENSE" NA
GWalkR "Apache License (>= 2)" NA
haven "MIT + file LICENSE" NA
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rsconnect NA NA NA "no" "4.4.2"
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rstan NA NA NA "yes" "4.4.1"
rstanarm NA NA NA "yes" "4.4.1"
rstantools NA NA NA "no" "4.4.1"
rstatix NA NA NA "no" "4.4.2"
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sandwich NA NA NA "no" "4.4.1"
sass NA NA NA "yes" "4.4.1"
scales NA NA NA "yes" "4.4.1"
see NA NA NA "no" "4.4.2"
selectr NA NA NA "no" "4.4.1"
sessioninfo NA NA NA "no" "4.4.2"
sf NA NA NA "yes" "4.4.2"
shape NA NA NA "no" "4.4.0"
shiny NA NA NA "no" "4.4.2"
shinycssloaders NA NA NA "no" "4.4.2"
shinyjs NA NA NA "no" "4.4.1"
shinystan NA NA NA "no" "4.4.1"
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sjmisc NA NA NA "no" "4.4.2"
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softbib NA NA NA "no" "4.4.2"
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spatial NA NA NA "yes" "4.4.2"
StanHeaders NA NA NA "yes" "4.4.1"
statmod NA NA NA "yes" "4.4.2"
stringi NA NA NA "yes" "4.4.1"
stringr NA NA NA "no" "4.4.1"
styler NA NA NA "no" "4.4.0"
summarytools NA NA NA "no" "4.4.2"
survey NA NA NA "yes" "4.4.2"
survival NA NA NA "yes" "4.4.2"
svglite NA NA NA "yes" "4.4.1"
sys NA NA NA "yes" "4.4.2"
systemfonts NA NA NA "yes" "4.4.2"
tables NA NA NA "no" "4.4.2"
tabulapdf NA NA NA "no" "4.4.2"
tensorA NA NA NA "yes" "4.4.0"
testthat NA NA NA "yes" "4.4.2"
textshaping NA NA NA "yes" "4.4.2"
threejs NA NA NA "no" "4.4.1"
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units NA NA NA "yes" "4.4.2"
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datasets NA NA NA NA "4.4.2"
foreign NA NA NA "yes" "4.4.2"
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grDevices NA NA NA "yes" "4.4.2"
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KernSmooth NA NA NA "yes" "4.4.2"
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# List of packages for session
.packages = c("ggplot2", "plyr", "rms")
# Install CRAN packages (if not already installed)
.inst <- .packages %in% installed.packages()
if(length(.packages[!.inst]) > 0) install.packages(.packages[!.inst])
# Load packages into session
lapply(.packages, require, character.only=TRUE)Meta-packages
Sometimes a number of packages that contain complementary functionality and are designed to work well together are brought under one meta-package, which allows for all those packages to be installed and loaded at once. The most popular such meta-package is the tidyverse, which includes such packages as dplyr (for data manipulation), readr (for reading in rectangular data like .csv files), tidyr (for cleaning datasets), stringr (for working with “strings”, that is, textual data), forcats (for managing “factors”, that is, categorical variables) or ggplot2 (for data visualisation), among [several others](https://www.tidyverse.org/packages/.
The tidyverse packages have been developed around a coding philosophy that is very different from that of “base R”. It is sometimes referred to as a special “dialect” of the R language and has greatly contributed to popularising R and making it more easily available to practising social scientists who do not have a programming background, by designing code whose “grammar” is somewhat closer to that of “human” languages such as English. This is generally thought to lower the entry barriers to R for new users, although there isn’t a clear consensus on that.
Another recently developed meta-package, which was specifically designed with non-programmer social scientists in mind, is the easystats bundle. We will be relying on easystats packages quite a lot in this module, as they provide a very coherent set of functions that improve on the tidyverse.
Package repositories
The Comprehensive R Archive Network (CRAN) is the central repository where thousands of user-written R packages are made available. Many more packages are distributed on code-sharing platforms such as GitHub or R Universe.
Installing packages
Packages made available on CRAN can be installed using the base-R command install.packages("packagename"). Once the package/library is installed (i.e. it is sitting somewhere on your computer), we can then load functions from that package using the :: operator (e.g. package::function()), or we can make all the functions from a package available by attaching that package with the library() function (e.g. library(package)).
So using a package/library is a two-stage process. We:
-
2.a. Load functions from the package as you use them, or: 2.b. Attach the whole package to R’s search path, making all functions available to use by name**Install** the package/library onto your computer (from CRAN or another repository)
Let’s start by installing the tidyverse meta-package, and then attach it:
Code
install.packages("tidyverse") ## this command installs packages from CRAN; note the quotation marks around the package nameYou can check the suite of packages that are available when you attach the tidyverse library using a command from the tidyverse itself:
Code
tidyverse_packages()Question
Why do you think we got an error message when we tried to run the above command?
Because tidyverse_packages() is itself a function from the tidyverse, in order to use that function we need not only to install the tidyverse but also to make its functions available. In other words, we did not yet attach the tidyverse for use in our R session, we only just installed it on our computers.
If we don’t want to attach a package that we have downloaded - because maybe we only want to use a single function once and we don’t want to burden our computer’s memory, we can load explicitly given functions from a package in the following way:
Code
tidyverse::tidyverse_packages() # Here we state the package followed by two colons, then followed by the function we wantBut in many cases we do want to use several functions at various points in an analysis session, so it is often useful to attach the entire package or set of packages:
Now we can use functions from that package without having to explicitly state the name of the package. We can still state the name explicitly, and that may be useful for readers of our code to understand what package a function come from. Also, it may happen that different packages have similarly named functions, and if all those packages are attached, then the functions from a package attached later will override that in the package attached earlier. R will note in a comment whether any functions from a package are masked by another, so it’s worth paying attention to the comments and warnings printed by R when we attach packages.
Installing and attaching packages
Both install.packages() and library() are base R functions, but there are several other user-written packages that provide additional functionality to make it easier and more efficient to install, attach and manage packages. For example, the pacman package contains a function p_load() that allows us to attach several packages at once and install them from CRAN on the fly if they are not yet installed. The sister function p_load_gh() does the same for packages not published on CRAN but stored on personal repositories on GitHub. The librarian package does the same with the shelf() function, which installs missing packages from CRAN as well as GitHub.
For example, we can download and attach a number of packages in one go with the command below:
Code
# First, install {librarian} itself if not yet installed:
if (!require("librarian")) install.packages("librarian")
# Then attach/install other packages using `librarian::shelf()`:
librarian::shelf(
tidyverse,
easystats,
sjlabelled,
gtsummary,
ggformula
)These are some useful packages that we will be using in this module. You can read more about the (meta)packages we have just installed here:
About the Tidyverse
Data frames and ‘tibbles’
The Tidyverse is built around the basic concept that data in a table should have one observation per row, one variable per column, and only one value per cell. Once data is in this ‘tidy’ format, it can be transformed, visualized and modelled for an analysis.
When using functions in the Tidyverse ecosystem, most data is returned as a tibble object. Tibbles are very similar to the data.frames (which are the basic types of object storing datasets in base R) and it is perfectly fine to use Tidyverse functions on a data.frame object. Just be aware that in most cases, the Tidyverse function will transform your data into a tibble. If you are unobservant, you won’t even notice a difference. However, there are a few differences between the two data types, most of which are just designed to make your life easier. For more info, check R4DS.
Selected dplyr functions
The dplyr package is designed to make it easier to manipulate flat (2-D) data (i.e. the type of datasets we are most likely to use, which are laid out as in a standard spreadsheet, with rows referring to cases (observations; respondents) and columns referring to variables. dplyr provides simple “verbs”, functions that correspond to the most common data manipulation tasks, to help you translate your thoughts into code. Here are some of the most common functions in dplyr:
-
filter()chooses rows based on column values. -
arrange()changes the order of the rows. -
select()changes whether or not a column is included. -
rename()changes the name of columns. -
mutate()/transmute()changes the values of columns and creates new columns (variables) -
summarise()compute statistical summaries (e.g., computing the mean or the sum) -
group_by()group data into rows with the same values -
ungroup()remove grouping information from data frame. -
distinct()remove duplicate rows.
All these functions work similarly as follows:
- The first argument is a data frame/tibble
- The subsequent arguments are comma separated list of unquoted variable names and the specification of what you want to do
- The result is a new data frame
For more info, check R for Social Scientists
Most of the dplyr verbs perform tasks that can also be done in base R, but they provide more convenience. The table below lists a rough equivalence between dplyr and base R functionality:
| dplyr | base |
|---|---|
arrange(df, x) |
df[order(x), , drop = FALSE] |
distinct(df, x) |
df[!duplicated(x), , drop = FALSE], unique()
|
filter(df, x) |
df[which(x), , drop = FALSE], subset()
|
mutate(df, z = x + y) |
df$z <- df$x + df$y, transform()
|
pull(df, 1) |
df[[1]] |
pull(df, x) |
df$x |
rename(df, y = x) |
names(df)[names(df) == "x"] <- "y" |
relocate(df, y) |
df[union("y", names(df))] |
select(df, x, y) |
df[c("x", "y")], subset()
|
select(df, starts_with("x")) |
df[grepl("^x", names(df))] |
summarise(df, mean(x)) |
mean(df$x), tapply(), aggregate(), by()
|
slice(df, c(1, 2, 5)) |
df[c(1, 2, 5), , drop = FALSE] |
The above functions allow us to manage single data-frames. A set of other functions (sometimes called “two-table verbs”) make it possible to combine columns, rows, or both, from two or more data-frames. In base-R, much of this can be achieved with the merge() function, while in dplyr the join() function makes this possible, extending some further functionality that is not easily available in base-R. The table below lists these dplyr functions and their base-R equivalents:
| dplyr | base |
|---|---|
inner_join(df1, df2) |
merge(df1, df2) |
left_join(df1, df2) |
merge(df1, df2, all.x = TRUE) |
right_join(df1, df2) |
merge(df1, df2, all.y = TRUE) |
full_join(df1, df2) |
merge(df1, df2, all = TRUE) |
semi_join(df1, df2) |
df1[df1$x %in% df2$x, , drop = FALSE] |
anti_join(df1, df2) |
df1[!df1$x %in% df2$x, , drop = FALSE] |
The forward-pipe (%>%/|>) workflow
All of the dplyr functions take a data frame or tibble as the first argument. Rather than forcing the user to either save intermediate objects or nest functions, dplyr provides the forward-pipe operator %>% from the magrittr package. This operator allows us to combine multiple operations into a single sequential chain of actions. As of R 4.1.0 there is also a native pipe operator in R (|>), and in RStudio one can set the shortcut to paste the new pipe operator instead (as we have done at the beginning of the lab). Going forward, we’ll use this version of the pipe operator for simplicity, but it’s likely that you will encounter the older version of the operator too in various scripts.
Let’s start with a hypothetical example. Say you would like to perform a sequence of operations on data frame x using hypothetical functions f(), g(), and h():
- Take x then
- Use x as an input to a function f() then
- Use the output of f(x) as an input to a function g() then
- Use the output of g(f(x)) as an input to a function h()
One way to achieve this sequence of operations is by using nesting parentheses as follows:
h(g(f(x)))This code isn’t so hard to read since we are applying only three functions: f(), then g(), then h() and each of the functions is short in its name. Further, each of these functions also only has one argument. However, you can imagine that this will get progressively harder to read as the number of functions applied in your sequence increases and the arguments in each function increase as well. This is where the pipe operator |> comes in handy. |> takes the output of one function and then “pipes” it to be the input of the next function. Furthermore, a helpful trick is to read |> as “then” or “and then.” For example, you can obtain the same output as the hypothetical sequence of functions as follows:
x |>
f() |>
g() |>
h()You would read this sequence as:
- Take x then
- Use this output as the input to the next function f() then
- Use this output as the input to the next function g() then
- Use this output as the input to the next function h()
So while both approaches achieve the same goal, the latter is much more human-readable because you can clearly read the sequence of operations line-by-line. Instead of typing out the three strange characters of the operator, one can use the keyboard shortcut Ctrl + Shift + M (Windows) or Cmd + Shift + M (MacOS) to paste the operator.